Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
SMARCA4P51532 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SMARCA4P51532 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMARCA4P51532 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMARCA4P51532 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMARCA4P51532 AC087501.5-201ENST00000607496 2374 ntBASIC11.39□□□□□ -0.59
SMARCA4P51532 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC11.38□□□□□ -0.59
SMARCA4P51532 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SMARCA4P51532 AC093155.2-201ENST00000420734 937 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC11.38□□□□□ -0.59
SMARCA4P51532 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC11.38□□□□□ -0.59
SMARCA4P51532 AC090958.1-201ENST00000511122 351 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 ATP5LP3-201ENST00000514223 304 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC11.38□□□□□ -0.59
SMARCA4P51532 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC11.38□□□□□ -0.59
SMARCA4P51532 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC11.38□□□□□ -0.59
SMARCA4P51532 AL953862.2-201ENST00000603089 820 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC11.38□□□□□ -0.59
SMARCA4P51532 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMARCA4P51532 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMARCA4P51532 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC11.38□□□□□ -0.59
SMARCA4P51532 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
SMARCA4P51532 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMARCA4P51532 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMARCA4P51532 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMARCA4P51532 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMARCA4P51532 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMARCA4P51532 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMARCA4P51532 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMARCA4P51532 OR9K1P-201ENST00000326513 941 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SMARCA4P51532 AC064862.4-201ENST00000442180 334 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 SUMO2P10-201ENST00000452006 288 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 AL445665.1-202ENST00000452436 324 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 ACA64.1-201ENST00000459171 127 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 COX6B1P2-201ENST00000489624 230 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 AL136038.1-201ENST00000497246 351 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 AC112191.2-201ENST00000522428 333 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC11.38□□□□□ -0.59
SMARCA4P51532 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC11.38□□□□□ -0.59
SMARCA4P51532 AC245014.3-201ENST00000618589 347 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 AC018445.2-201ENST00000622987 260 ntBASIC11.38□□□□□ -0.59
SMARCA4P51532 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC11.38□□□□□ -0.59
SMARCA4P51532 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMARCA4P51532 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMARCA4P51532 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMARCA4P51532 AC007485.2-201ENST00000623493 1667 ntBASIC11.37□□□□□ -0.59
SMARCA4P51532 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMARCA4P51532 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
SMARCA4P51532 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMARCA4P51532 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
SMARCA4P51532 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SMARCA4P51532 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC11.37□□□□□ -0.59
SMARCA4P51532 OLR1-210ENST00000544577 924 ntTSL 5 BASIC11.37□□□□□ -0.59
SMARCA4P51532 AC090616.1-201ENST00000583895 447 ntBASIC11.37□□□□□ -0.59
SMARCA4P51532 BNIP3P32-201ENST00000600015 554 ntBASIC11.37□□□□□ -0.59
SMARCA4P51532 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SMARCA4P51532 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMARCA4P51532 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SMARCA4P51532 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SMARCA4P51532 CASC19-228ENST00000641414 1684 ntBASIC11.37□□□□□ -0.59
SMARCA4P51532 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC11.37□□□□□ -0.59
SMARCA4P51532 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC11.36□□□□□ -0.59
SMARCA4P51532 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
SMARCA4P51532 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMARCA4P51532 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMARCA4P51532 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC11.36□□□□□ -0.59
SMARCA4P51532 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SMARCA4P51532 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMARCA4P51532 CUBNP3-201ENST00000457461 1784 ntBASIC11.36□□□□□ -0.59
SMARCA4P51532 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC11.36□□□□□ -0.59
SMARCA4P51532 RN7SKP293-201ENST00000411389 296 ntBASIC11.36□□□□□ -0.59
SMARCA4P51532 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMARCA4P51532 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMARCA4P51532 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC11.36□□□□□ -0.59
SMARCA4P51532 RPS27AP2-201ENST00000457576 465 ntBASIC11.36□□□□□ -0.59
SMARCA4P51532 RN7SL561P-201ENST00000488553 281 ntBASIC11.36□□□□□ -0.59
SMARCA4P51532 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC11.36□□□□□ -0.59
SMARCA4P51532 ZNF322P1-201ENST00000568013 1209 ntBASIC11.36□□□□□ -0.59
SMARCA4P51532 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC11.36□□□□□ -0.59
SMARCA4P51532 AC022106.1-201ENST00000612834 766 ntBASIC11.36□□□□□ -0.59
SMARCA4P51532 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SMARCA4P51532 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMARCA4P51532 AL035555.1-201ENST00000404462 1790 ntBASIC11.36□□□□□ -0.59
SMARCA4P51532 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMARCA4P51532 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMARCA4P51532 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMARCA4P51532 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMARCA4P51532 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC11.35□□□□□ -0.59
SMARCA4P51532 RNU1-134P-201ENST00000362935 165 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 MIR143-201ENST00000385300 106 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 AL132875.1-201ENST00000403623 949 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC11.35□□□□□ -0.59
SMARCA4P51532 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC11.35□□□□□ -0.59
SMARCA4P51532 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC11.35□□□□□ -0.59
SMARCA4P51532 AC021269.1-201ENST00000526860 705 ntBASIC11.35□□□□□ -0.59
SMARCA4P51532 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC11.35□□□□□ -0.59
SMARCA4P51532 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SMARCA4P51532 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms