Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.88□□□□□ -1.31
HTTP42858 IGLV3-30-201ENST00000524362 298 ntBASIC6.88□□□□□ -1.31
HTTP42858 AL121579.2-201ENST00000555466 590 ntBASIC6.88□□□□□ -1.31
HTTP42858 RN7SL708P-201ENST00000580952 299 ntBASIC6.88□□□□□ -1.31
HTTP42858 AC027229.1-201ENST00000583887 253 ntBASIC6.88□□□□□ -1.31
HTTP42858 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HTTP42858 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 AC091544.5-201ENST00000620192 3815 ntBASIC6.88□□□□□ -1.31
HTTP42858 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC6.88□□□□□ -1.31
HTTP42858 AL161756.3-201ENST00000641216 2071 ntBASIC6.88□□□□□ -1.31
HTTP42858 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC6.88□□□□□ -1.31
HTTP42858 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 KIF4CP-201ENST00000422742 1279 ntBASIC6.87□□□□□ -1.31
HTTP42858 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HTTP42858 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HTTP42858 MIR6085-201ENST00000618314 110 ntBASIC6.87□□□□□ -1.31
HTTP42858 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 AC011815.2-201ENST00000618230 2021 ntBASIC6.87□□□□□ -1.31
HTTP42858 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC6.87□□□□□ -1.31
HTTP42858 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.87□□□□□ -1.31
HTTP42858 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
HTTP42858 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
HTTP42858 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.87□□□□□ -1.31
HTTP42858 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 RNU1-106P-201ENST00000384382 164 ntBASIC6.87□□□□□ -1.31
HTTP42858 CYB5AP4-201ENST00000396692 399 ntBASIC6.87□□□□□ -1.31
HTTP42858 RPS7P8-201ENST00000418311 581 ntBASIC6.87□□□□□ -1.31
HTTP42858 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.87□□□□□ -1.31
HTTP42858 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.87□□□□□ -1.31
HTTP42858 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.87□□□□□ -1.31
HTTP42858 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.87□□□□□ -1.31
HTTP42858 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.87□□□□□ -1.31
HTTP42858 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.87□□□□□ -1.31
HTTP42858 AL121612.2-201ENST00000612261 482 ntBASIC6.87□□□□□ -1.31
HTTP42858 AC005393.1-201ENST00000617916 584 ntBASIC6.87□□□□□ -1.31
HTTP42858 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.87□□□□□ -1.31
HTTP42858 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HTTP42858 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC6.87□□□□□ -1.31
HTTP42858 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
HTTP42858 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.87□□□□□ -1.31
HTTP42858 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.87□□□□□ -1.31
HTTP42858 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.87□□□□□ -1.31
HTTP42858 AC004453.1-201ENST00000487895 408 ntBASIC6.87□□□□□ -1.31
HTTP42858 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.87□□□□□ -1.31
HTTP42858 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HTTP42858 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 MIR4505-201ENST00000582238 73 ntBASIC6.87□□□□□ -1.31
HTTP42858 AC012254.3-201ENST00000591183 2117 ntBASIC6.87□□□□□ -1.31
HTTP42858 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.87□□□□□ -1.31
HTTP42858 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HTTP42858 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.87□□□□□ -1.31
HTTP42858 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC6.87□□□□□ -1.31
HTTP42858 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC6.87□□□□□ -1.31
HTTP42858 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.86□□□□□ -1.31
HTTP42858 MAPK10-287ENST00000641217 3037 ntBASIC6.86□□□□□ -1.31
HTTP42858 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
HTTP42858 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.86□□□□□ -1.31
HTTP42858 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HTTP42858 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.86□□□□□ -1.31
HTTP42858 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HTTP42858 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.86□□□□□ -1.31
HTTP42858 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HTTP42858 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.86□□□□□ -1.31
HTTP42858 SNORA43.1-201ENST00000364863 140 ntBASIC6.86□□□□□ -1.31
HTTP42858 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.86□□□□□ -1.31
HTTP42858 METTL15P3-201ENST00000415522 1221 ntBASIC6.86□□□□□ -1.31
HTTP42858 AL645937.3-201ENST00000453647 936 ntBASIC6.86□□□□□ -1.31
HTTP42858 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 AC087360.1-201ENST00000518788 616 ntBASIC6.86□□□□□ -1.31
HTTP42858 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HTTP42858 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.86□□□□□ -1.31
HTTP42858 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.86□□□□□ -1.31
HTTP42858 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.86□□□□□ -1.31
HTTP42858 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.86□□□□□ -1.31
HTTP42858 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC6.86□□□□□ -1.31
HTTP42858 AF230666.2-201ENST00000602328 725 ntBASIC6.86□□□□□ -1.31
HTTP42858 AL512329.2-201ENST00000607350 548 ntBASIC6.86□□□□□ -1.31
HTTP42858 AP000550.3-201ENST00000637734 379 ntBASIC6.86□□□□□ -1.31
HTTP42858 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 LONP2-201ENST00000285737 8199 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.86□□□□□ -1.31
HTTP42858 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC6.86□□□□□ -1.31
HTTP42858 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms