Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX3P41225 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX3P41225 ARGFXP2-201ENST00000579304 949 ntBASIC6.28□□□□□ -1.4
SOX3P41225 AC024267.2-201ENST00000582737 417 ntBASIC6.28□□□□□ -1.4
SOX3P41225 AC036176.3-201ENST00000602456 418 ntBASIC6.28□□□□□ -1.4
SOX3P41225 AC005479.3-201ENST00000602790 431 ntBASIC6.28□□□□□ -1.4
SOX3P41225 DIMT1P1-201ENST00000603970 763 ntBASIC6.28□□□□□ -1.4
SOX3P41225 AC087269.2-201ENST00000641764 975 ntBASIC6.28□□□□□ -1.4
SOX3P41225 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SOX3P41225 TMEM75-201ENST00000624314 2165 ntBASIC6.28□□□□□ -1.4
SOX3P41225 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX3P41225 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.28□□□□□ -1.4
SOX3P41225 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SOX3P41225 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX3P41225 AC067942.1-201ENST00000488045 1493 ntBASIC6.28□□□□□ -1.4
SOX3P41225 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX3P41225 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.41
SOX3P41225 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
SOX3P41225 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX3P41225 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX3P41225 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 AL137918.1-201ENST00000624542 1922 ntBASIC6.27□□□□□ -1.41
SOX3P41225 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SOX3P41225 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 ZNF806-201ENST00000438300 1774 ntBASIC6.27□□□□□ -1.41
SOX3P41225 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 RNA5SP333-201ENST00000363466 118 ntBASIC6.27□□□□□ -1.41
SOX3P41225 RNA5SP334-201ENST00000364825 118 ntBASIC6.27□□□□□ -1.41
SOX3P41225 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX3P41225 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX3P41225 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX3P41225 GAPDHP57-201ENST00000424400 585 ntBASIC6.27□□□□□ -1.41
SOX3P41225 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 AL121578.2-201ENST00000448797 447 ntBASIC6.27□□□□□ -1.41
SOX3P41225 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX3P41225 CEACAMP11-201ENST00000455211 583 ntBASIC6.27□□□□□ -1.41
SOX3P41225 RPS3AP49-201ENST00000472161 790 ntBASIC6.27□□□□□ -1.41
SOX3P41225 RN7SL37P-201ENST00000490461 307 ntBASIC6.27□□□□□ -1.41
SOX3P41225 RN7SL612P-201ENST00000497704 295 ntBASIC6.27□□□□□ -1.41
SOX3P41225 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX3P41225 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX3P41225 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX3P41225 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX3P41225 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX3P41225 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX3P41225 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.27□□□□□ -1.41
SOX3P41225 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX3P41225 OR4C49P-201ENST00000563891 900 ntBASIC6.27□□□□□ -1.41
SOX3P41225 PPIAP14-201ENST00000577627 496 ntBASIC6.27□□□□□ -1.41
SOX3P41225 CTSLP2-201ENST00000580501 394 ntBASIC6.27□□□□□ -1.41
SOX3P41225 RN7SL66P-201ENST00000582099 264 ntBASIC6.27□□□□□ -1.41
SOX3P41225 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX3P41225 AC137695.1-201ENST00000604126 489 ntBASIC6.27□□□□□ -1.41
SOX3P41225 AL590032.1-201ENST00000604920 252 ntBASIC6.27□□□□□ -1.41
SOX3P41225 AC006328.2-201ENST00000623198 397 ntBASIC6.27□□□□□ -1.41
SOX3P41225 AC012005.2-201ENST00000624333 397 ntBASIC6.27□□□□□ -1.41
SOX3P41225 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SOX3P41225 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX3P41225 CLUHP10-201ENST00000631979 980 ntBASIC6.27□□□□□ -1.41
SOX3P41225 AL354702.2-202ENST00000641481 890 ntBASIC6.27□□□□□ -1.41
SOX3P41225 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX3P41225 AL033543.1-201ENST00000623440 13454 ntBASIC6.27□□□□□ -1.41
SOX3P41225 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX3P41225 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX3P41225 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.27□□□□□ -1.41
SOX3P41225 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX3P41225 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
SOX3P41225 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX3P41225 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX3P41225 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SOX3P41225 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX3P41225 AC034229.2-201ENST00000566945 2508 ntBASIC6.26□□□□□ -1.41
SOX3P41225 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX3P41225 AL359694.2-201ENST00000567753 1615 ntBASIC6.26□□□□□ -1.41
SOX3P41225 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX3P41225 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SOX3P41225 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX3P41225 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SOX3P41225 CYCSP17-201ENST00000407870 315 ntBASIC6.26□□□□□ -1.41
SOX3P41225 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX3P41225 PAICSP2-201ENST00000429118 1150 ntBASIC6.26□□□□□ -1.41
SOX3P41225 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX3P41225 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX3P41225 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms