Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 PWAR5-201ENST00000624480 3180 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC131971.1-201ENST00000332881 1482 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 CBX3P1-201ENST00000325243 554 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 SNORD86-201ENST00000391196 86 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 TAF9BP2-201ENST00000400856 499 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 MIR1269A-201ENST00000408636 105 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AL158825.1-201ENST00000414735 521 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC009480.2-201ENST00000422916 432 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 GTF2IP2-201ENST00000424290 697 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AP003385.1-201ENST00000426387 893 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 GAPDHP28-201ENST00000455134 1003 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 RN7SL856P-201ENST00000461754 298 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 RN7SL395P-201ENST00000462960 291 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 RN7SL63P-201ENST00000468228 304 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 MTND3P22-201ENST00000510932 243 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC093770.1-201ENST00000511559 571 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AP005597.3-201ENST00000532369 799 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC106734.1-201ENST00000568646 663 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 OR7D1P-201ENST00000592739 933 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC096553.1-201ENST00000605169 829 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AL034428.1-202ENST00000613736 625 ntTSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AL356317.1-201ENST00000396110 1436 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 AL049833.3-201ENST00000623920 3738 ntBASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CUEDC1Q9NWM3 OR51E1-202ENST00000530215 2942 ntBASIC8.09□□□□□ -1.12
CUEDC1Q9NWM3 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
CUEDC1Q9NWM3 EEF1A1P10-201ENST00000475365 1390 ntBASIC8.09□□□□□ -1.12
CUEDC1Q9NWM3 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 MITF-202ENST00000314589 1993 ntTSL 2 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 FO393411.1-201ENST00000325612 420 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 RN7SKP37-201ENST00000364494 296 ntBASIC8.08□□□□□ -1.12
CUEDC1Q9NWM3 SNORA73A-201ENST00000364938 206 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms