Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 NCAPD2P1-201ENST00000432906 1801 ntBASIC7.99□□□□□ -1.13
CNTNAP3Q9BZ76 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC130456.1-201ENST00000565085 1363 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 BTN2A2-202ENST00000356709 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 RNU4-12P-201ENST00000365233 139 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 RNU6-876P-201ENST00000391295 104 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 RN7SKP58-201ENST00000411010 305 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 NPM1P36-201ENST00000415681 835 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 RPL3P4-201ENST00000417615 423 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 PPIAP23-201ENST00000420099 497 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 GLRXP1-201ENST00000423261 334 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 RPSAP62-201ENST00000432596 833 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 BTF3P10-201ENST00000433415 495 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 UBE2V1P3-201ENST00000439651 417 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 RPS10P14-201ENST00000440748 502 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 PPIAP32-201ENST00000449940 472 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 ST13P14-201ENST00000474095 734 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AL117692.1-201ENST00000494283 713 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC011352.3-201ENST00000505162 593 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC021146.7-201ENST00000509604 775 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 IGLV10-67-201ENST00000519446 325 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC124891.1-201ENST00000536322 519 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 PSMA3P-201ENST00000555485 635 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 CFL2-206ENST00000556161 546 ntTSL 4 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AL359715.3-201ENST00000569267 2123 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 RN7SL785P-201ENST00000578437 253 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 MIR4642-201ENST00000583943 82 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC005261.5-201ENST00000596280 355 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AL513479.1-201ENST00000611376 585 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC091304.9-201ENST00000612091 226 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC026887.1-201ENST00000624657 2985 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC005355.2-201ENST00000625064 484 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 LEO1-202ENST00000315141 1981 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 CALCOCO2-215ENST00000509507 1512 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 AC117945.2-201ENST00000642109 1521 ntBASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNTNAP3Q9BZ76 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNTNAP3Q9BZ76 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNTNAP3Q9BZ76 AC024610.2-205ENST00000584758 1567 ntTSL 5 BASIC7.97□□□□□ -1.13
CNTNAP3Q9BZ76 MFAP5-203ENST00000433590 2308 ntTSL 2 BASIC7.97□□□□□ -1.13
CNTNAP3Q9BZ76 KCTD16-202ENST00000512467 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNTNAP3Q9BZ76 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms