Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.12□□□□□ -1.11
USB1Q9BQ65 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC8.12□□□□□ -1.11
USB1Q9BQ65 FAM98B-203ENST00000491535 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USB1Q9BQ65 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 FAM149B1P1-201ENST00000533428 1610 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL031985.3-201ENST00000565390 2449 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 CRX-207ENST00000613299 4193 ntTSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 UGT1A1-202ENST00000360418 3389 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 PPIE-201ENST00000324379 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 Y_RNA.1-201ENST00000352915 104 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 EI24P3-201ENST00000399046 1062 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 NACAP7-201ENST00000407371 609 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 MIR1306-201ENST00000408439 85 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 RPS3AP3-201ENST00000411933 242 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 STSP1-201ENST00000412493 1151 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 RPL4P5-201ENST00000413888 1276 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 EIF3KP2-201ENST00000415266 626 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL121910.1-201ENST00000420710 500 ntTSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC006065.1-201ENST00000422539 802 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 ATP5G1P5-201ENST00000429024 411 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 CYCSP11-201ENST00000436426 315 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC136896.1-201ENST00000438334 547 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 OR2W6P-201ENST00000439689 939 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 ARMC8P1-201ENST00000443069 1289 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 OR52E7P-201ENST00000452394 933 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL513533.1-201ENST00000453728 415 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC233279.1-201ENST00000455300 423 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 DCD-202ENST00000456047 670 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC093166.4-201ENST00000457867 318 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 RN7SL507P-201ENST00000474076 296 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AP005202.1-201ENST00000489915 867 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 RN7SL37P-201ENST00000490461 307 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC136628.1-201ENST00000503218 561 ntTSL 4 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 NIFKP7-201ENST00000503365 834 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 RAB5CP2-201ENST00000505368 637 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 RPL7L1P4-201ENST00000513004 707 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC010493.1-201ENST00000513479 292 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 RNU6-1281P-201ENST00000516223 105 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 CDC42P3-201ENST00000518493 633 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 GABRP-207ENST00000519598 1284 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC120042.1-201ENST00000524309 550 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC109635.6-201ENST00000525487 1113 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 CACNA1C-AS2-201ENST00000545526 609 ntTSL 2 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC128707.1-202ENST00000548963 693 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC079907.2-201ENST00000550307 1034 ntTSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL357153.2-201ENST00000556646 565 ntTSL 4 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC137527.1-201ENST00000565839 1261 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL355375.2-201ENST00000574825 175 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC003965.1-201ENST00000575693 667 ntTSL 3 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 KPNA2P3-201ENST00000584190 848 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC011416.3-201ENST00000603971 355 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL713922.2-201ENST00000619384 716 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL139351.1-201ENST00000622092 320 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 LINC00282-201ENST00000626362 654 ntAPPRIS P5 TSL 4 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AC093591.3-201ENST00000634516 308 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL354740.1-201ENST00000586726 2681 ntTSL 5 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 AL356289.3-201ENST00000640049 2669 ntBASIC8.11□□□□□ -1.11
USB1Q9BQ65 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
USB1Q9BQ65 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USB1Q9BQ65 CYP1D1P-201ENST00000416662 1433 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms