Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BEST4Q8NFU0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
BEST4Q8NFU0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
BEST4Q8NFU0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
BEST4Q8NFU0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BEST4Q8NFU0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BEST4Q8NFU0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
BEST4Q8NFU0 ATP5BP1-201ENST00000411980 1574 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AL121839.2-201ENST00000565058 6943 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AL359263.1-201ENST00000441188 2796 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AC087516.1-201ENST00000561236 2428 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 LINC01616-201ENST00000561816 2280 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AC011455.2-201ENST00000599320 3336 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 MTCO1P46-201ENST00000451639 1491 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 PPIAP26-201ENST00000377951 522 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 NHP2P2-201ENST00000396362 460 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 CYCSP17-201ENST00000407870 315 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AC239367.3-201ENST00000428996 814 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AF274573.1-201ENST00000430535 494 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 MARK2P8-201ENST00000476069 952 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 TAAR3P-202ENST00000481759 1025 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AC111000.5-201ENST00000506559 1178 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 NACAP6-201ENST00000509572 622 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AP003084.1-201ENST00000524828 742 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AC023310.2-201ENST00000553844 547 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 AC007494.1-201ENST00000562293 760 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 EIF4A3P1-201ENST00000578499 647 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 CARSP1-201ENST00000603171 889 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 PART1_3.1-201ENST00000619680 131 ntBASIC5.67□□□□□ -1.5
BEST4Q8NFU0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.67□□□□□ -1.5
BEST4Q8NFU0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 RACGAP1P-201ENST00000550663 1879 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC011815.2-201ENST00000618230 2021 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 SNORA70.5-201ENST00000365519 135 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AL157698.1-201ENST00000415190 1011 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AL121578.1-201ENST00000428051 892 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC018804.1-201ENST00000430381 618 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 NMNAT1P3-201ENST00000457517 888 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC016489.1-201ENST00000461109 375 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms