Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC093524.1-201ENST00000564266 1094 ntBASIC7.63□□□□□ -1.19
PHC3Q8NDX5 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 MIR3689C-201ENST00000581239 72 ntBASIC7.63□□□□□ -1.19
PHC3Q8NDX5 NBR2-204ENST00000587322 63 ntBASIC7.63□□□□□ -1.19
PHC3Q8NDX5 AC024060.1-201ENST00000607052 494 ntBASIC7.63□□□□□ -1.19
PHC3Q8NDX5 AL021807.1-201ENST00000607175 565 ntBASIC7.63□□□□□ -1.19
PHC3Q8NDX5 AC090425.2-201ENST00000608818 501 ntBASIC7.63□□□□□ -1.19
PHC3Q8NDX5 AC012488.1-201ENST00000611221 640 ntBASIC7.63□□□□□ -1.19
PHC3Q8NDX5 AC015922.4-201ENST00000612568 690 ntBASIC7.63□□□□□ -1.19
PHC3Q8NDX5 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.63□□□□□ -1.19
PHC3Q8NDX5 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHC3Q8NDX5 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 CDYLP1-201ENST00000419017 1458 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 CR382285.2-201ENST00000624662 1495 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AL133243.4-201ENST00000623116 3109 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 RNU6-1214P-201ENST00000363650 109 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 YWHAZP3-201ENST00000415292 738 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 MTND4P3-201ENST00000417829 541 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 BTF3P9-201ENST00000418784 283 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 OR5M13P-201ENST00000433944 937 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 UBE2D3P1-201ENST00000436669 444 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC000041.1-201ENST00000439655 175 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 MTCO2P7-201ENST00000446518 666 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AL589880.1-201ENST00000448271 287 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 MTND2P14-201ENST00000482139 351 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC126121.1-201ENST00000482313 553 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC107956.2-201ENST00000496042 454 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 ADI1P2-201ENST00000514945 429 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AP001124.1-201ENST00000529628 385 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 NPIPP1-203ENST00000547107 1071 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 FDPSP3-201ENST00000556903 1013 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 MIR4262-201ENST00000578394 54 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AL035411.2-201ENST00000604022 421 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC007349.4-201ENST00000608114 532 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 AL022163.1-201ENST00000430261 1569 ntBASIC7.62□□□□□ -1.19
PHC3Q8NDX5 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PHC3Q8NDX5 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms