Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 RPL23AP68-201ENST00000480924 445 ntBASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AC015524.1-201ENST00000491585 472 ntBASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AL049840.5-201ENST00000602827 552 ntBASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AC139493.1-201ENST00000604368 397 ntBASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AC005277.2-201ENST00000617898 390 ntBASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf40Q8IXQ3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 RNU1-24P-201ENST00000364285 165 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 SEPT7P2-202ENST00000398921 823 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AL929472.1-201ENST00000417484 429 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 NPM1P23-201ENST00000440193 849 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 GAPDHP37-201ENST00000442317 968 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AL356121.1-201ENST00000442911 156 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 CCNJP1-201ENST00000450600 1149 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 SNRPCP11-201ENST00000492453 205 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC093870.1-201ENST00000506837 213 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC008429.2-201ENST00000523057 864 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC026956.1-201ENST00000558741 396 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AL356986.1-201ENST00000604085 341 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC004241.2-201ENST00000614562 444 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 HTR1DP1-201ENST00000616500 888 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 MIR7854-201ENST00000620068 65 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC068213.1-201ENST00000625124 226 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC022819.1-201ENST00000563495 3910 ntBASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
C9orf40Q8IXQ3 AC004014.2-201ENST00000623718 5122 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms