Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 RNU1-46P-201ENST00000384425 164 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AL023284.3-201ENST00000407767 334 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 Z68694.1-201ENST00000413929 841 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 RPL7AP14-201ENST00000424041 802 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 ATP5LP2-201ENST00000440646 311 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AC110749.1-201ENST00000462007 357 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AC090022.1-201ENST00000546569 311 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AC011445.2-201ENST00000599274 173 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AC027348.2-201ENST00000624375 642 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 AP003486.1-201ENST00000525716 3994 ntBASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 TMSB4XP4-201ENST00000323496 618 ntBASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 HIGD1AP16-201ENST00000450986 258 ntBASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 AC011476.1-201ENST00000466725 307 ntBASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 OR5H7P-201ENST00000514084 930 ntBASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 CETN3-206ENST00000522864 738 ntTSL 3 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 AC023245.2-201ENST00000530760 2978 ntBASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 MIR6809-201ENST00000612189 116 ntBASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 5S_rRNA.28-201ENST00000638107 119 ntBASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 CYP2G2P-201ENST00000594920 1485 ntBASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 AL139384.2-201ENST00000613809 3590 ntBASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42BPAQ5VT25 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 AL451046.1-201ENST00000406097 534 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 RPS7P8-201ENST00000418311 581 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 BX284632.2-201ENST00000421091 399 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 AC079355.1-201ENST00000421770 223 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 AL512605.1-202ENST00000441919 381 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 AL359955.2-201ENST00000445380 353 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 IGHVIII-67-4-201ENST00000524281 296 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 AC092121.1-201ENST00000569452 202 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 AC090236.2-201ENST00000587933 1101 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 EIF3EP1-201ENST00000433978 1316 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 CASC19-238ENST00000641523 1558 ntBASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42BPAQ5VT25 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 RNFT1P3-201ENST00000340898 1052 ntBASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 RNU1-49P-201ENST00000363468 159 ntBASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 NDUFS5P5-201ENST00000437256 321 ntBASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 PCBP2P1-201ENST00000437262 977 ntBASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 RNA5SP362-201ENST00000516048 118 ntBASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 AC027544.3-201ENST00000535082 757 ntBASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 DCN-209ENST00000546745 1026 ntTSL 3 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC9.65□□□□□ -0.86
CDC42BPAQ5VT25 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms