Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX6-1P78426 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX6-1P78426 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.45□□□□□ -1.38
NKX6-1P78426 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.45□□□□□ -1.38
NKX6-1P78426 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.45□□□□□ -1.38
NKX6-1P78426 CDY8P-201ENST00000428380 1279 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX6-1P78426 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX6-1P78426 AC092106.1-201ENST00000444291 373 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 SS18L2P1-201ENST00000445923 213 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 CDY20P-201ENST00000447528 1279 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX6-1P78426 AC018892.2-201ENST00000457656 693 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 RN7SL688P-201ENST00000471754 275 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 RPS4XP17-201ENST00000479057 754 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 NPY6R-201ENST00000503807 1112 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 MTCO3P27-201ENST00000514397 196 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 AP003355.1-201ENST00000518956 587 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 SOX5P1-201ENST00000524155 1127 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX6-1P78426 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.45□□□□□ -1.38
NKX6-1P78426 PDCL3P1-201ENST00000534575 734 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.45□□□□□ -1.38
NKX6-1P78426 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
NKX6-1P78426 CHEK2P2-201ENST00000554701 672 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 CD24P2-201ENST00000565486 219 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 RN7SL339P-201ENST00000580597 296 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 AC061975.3-201ENST00000583209 244 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.45□□□□□ -1.38
NKX6-1P78426 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX6-1P78426 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NKX6-1P78426 MTCO3P22-201ENST00000603219 784 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 AC008759.3-201ENST00000613300 508 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.45□□□□□ -1.38
NKX6-1P78426 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.45□□□□□ -1.38
NKX6-1P78426 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.45□□□□□ -1.38
NKX6-1P78426 SNORA43.5-201ENST00000631270 138 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.45□□□□□ -1.38
NKX6-1P78426 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.45□□□□□ -1.38
NKX6-1P78426 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 WASF5P-205ENST00000428639 1455 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 TMEM75-201ENST00000624314 2165 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 NAMPTP1-201ENST00000440465 2514 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 AC110716.2-201ENST00000563865 3945 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.45□□□□□ -1.38
NKX6-1P78426 AC004014.2-201ENST00000623718 5122 ntBASIC6.45□□□□□ -1.38
NKX6-1P78426 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NKX6-1P78426 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
NKX6-1P78426 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX6-1P78426 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX6-1P78426 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.44□□□□□ -1.38
NKX6-1P78426 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.44□□□□□ -1.38
NKX6-1P78426 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NKX6-1P78426 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX6-1P78426 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX6-1P78426 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.44□□□□□ -1.38
NKX6-1P78426 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.44□□□□□ -1.38
NKX6-1P78426 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.44□□□□□ -1.38
NKX6-1P78426 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
NKX6-1P78426 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.44□□□□□ -1.38
NKX6-1P78426 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NKX6-1P78426 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
NKX6-1P78426 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
NKX6-1P78426 DDX10P2-201ENST00000417796 2614 ntBASIC6.44□□□□□ -1.38
NKX6-1P78426 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX6-1P78426 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.44□□□□□ -1.38
NKX6-1P78426 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NKX6-1P78426 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NKX6-1P78426 RN7SKP36-201ENST00000363997 312 ntBASIC6.44□□□□□ -1.38
NKX6-1P78426 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.44□□□□□ -1.38
NKX6-1P78426 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NKX6-1P78426 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.44□□□□□ -1.38
NKX6-1P78426 MIR551B-201ENST00000384984 96 ntBASIC6.44□□□□□ -1.38
NKX6-1P78426 MIR122-201ENST00000385044 85 ntBASIC6.44□□□□□ -1.38
NKX6-1P78426 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX6-1P78426 AL139806.1-201ENST00000403057 1002 ntBASIC6.44□□□□□ -1.38
NKX6-1P78426 AL451061.1-201ENST00000407887 862 ntBASIC6.44□□□□□ -1.38
NKX6-1P78426 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX6-1P78426 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.44□□□□□ -1.38
NKX6-1P78426 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NKX6-1P78426 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.44□□□□□ -1.38
NKX6-1P78426 CYP4F34P-201ENST00000425951 481 ntBASIC6.44□□□□□ -1.38
NKX6-1P78426 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.44□□□□□ -1.38
NKX6-1P78426 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.44□□□□□ -1.38
NKX6-1P78426 AC244505.2-201ENST00000435089 759 ntBASIC6.44□□□□□ -1.38
NKX6-1P78426 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.44□□□□□ -1.38
NKX6-1P78426 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.44□□□□□ -1.38
NKX6-1P78426 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.44□□□□□ -1.38
NKX6-1P78426 AL451074.4-201ENST00000447545 470 ntBASIC6.44□□□□□ -1.38
NKX6-1P78426 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NKX6-1P78426 AC019080.2-201ENST00000453859 394 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms