Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.63□□□□□ -1.19
CCNA1P78396 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 AC009831.5-201ENST00000624000 3189 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 AC104837.1-201ENST00000444644 1587 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.63□□□□□ -1.19
CCNA1P78396 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.63□□□□□ -1.19
CCNA1P78396 AC122713.2-201ENST00000624942 3335 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 RPL9P21-201ENST00000392269 505 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 RN7SKP232-201ENST00000410170 290 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 AC017035.1-201ENST00000411999 1115 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 MTND6P1-201ENST00000417434 424 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.63□□□□□ -1.19
CCNA1P78396 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 EIF5AP4-201ENST00000441206 465 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.63□□□□□ -1.19
CCNA1P78396 RN7SL254P-201ENST00000460609 284 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 NDUFA5P5-201ENST00000468361 342 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.63□□□□□ -1.19
CCNA1P78396 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.63□□□□□ -1.19
CCNA1P78396 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.63□□□□□ -1.19
CCNA1P78396 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.63□□□□□ -1.19
CCNA1P78396 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.63□□□□□ -1.19
CCNA1P78396 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.63□□□□□ -1.19
CCNA1P78396 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.63□□□□□ -1.19
CCNA1P78396 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.63□□□□□ -1.19
CCNA1P78396 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.63□□□□□ -1.19
CCNA1P78396 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.63□□□□□ -1.19
CCNA1P78396 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.63□□□□□ -1.19
CCNA1P78396 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.63□□□□□ -1.19
CCNA1P78396 CASC19-212ENST00000641153 1287 ntBASIC7.63□□□□□ -1.19
CCNA1P78396 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.63□□□□□ -1.19
CCNA1P78396 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.63□□□□□ -1.19
CCNA1P78396 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CCNA1P78396 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.63□□□□□ -1.19
CCNA1P78396 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.63□□□□□ -1.19
CCNA1P78396 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
CCNA1P78396 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CCNA1P78396 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.62□□□□□ -1.19
CCNA1P78396 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.62□□□□□ -1.19
CCNA1P78396 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.62□□□□□ -1.19
CCNA1P78396 CYP4F32P-201ENST00000426492 504 ntBASIC7.62□□□□□ -1.19
CCNA1P78396 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.62□□□□□ -1.19
CCNA1P78396 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.62□□□□□ -1.19
CCNA1P78396 TVP23CP1-201ENST00000450317 639 ntBASIC7.62□□□□□ -1.19
CCNA1P78396 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.62□□□□□ -1.19
CCNA1P78396 Z83838.1-202ENST00000456225 839 ntBASIC7.62□□□□□ -1.19
CCNA1P78396 UGT2A3P7-201ENST00000510485 734 ntBASIC7.62□□□□□ -1.19
CCNA1P78396 AC122713.1-201ENST00000518368 1015 ntBASIC7.62□□□□□ -1.19
CCNA1P78396 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.62□□□□□ -1.19
CCNA1P78396 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.62□□□□□ -1.19
CCNA1P78396 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.62□□□□□ -1.19
CCNA1P78396 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.62□□□□□ -1.19
CCNA1P78396 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.62□□□□□ -1.19
CCNA1P78396 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.62□□□□□ -1.19
CCNA1P78396 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC7.62□□□□□ -1.19
CCNA1P78396 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.62□□□□□ -1.19
CCNA1P78396 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.62□□□□□ -1.19
CCNA1P78396 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.62□□□□□ -1.19
CCNA1P78396 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.62□□□□□ -1.19
CCNA1P78396 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.62□□□□□ -1.19
CCNA1P78396 U1.41-201ENST00000617626 165 ntBASIC7.62□□□□□ -1.19
CCNA1P78396 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.62□□□□□ -1.19
CCNA1P78396 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.62□□□□□ -1.19
CCNA1P78396 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.62□□□□□ -1.19
CCNA1P78396 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
CCNA1P78396 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.62□□□□□ -1.19
CCNA1P78396 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.62□□□□□ -1.19
CCNA1P78396 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCNA1P78396 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CCNA1P78396 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CCNA1P78396 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCNA1P78396 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms