Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL139805.2-201ENST00000455305 2433 ntBASIC5.47□□□□□ -1.53
LMO4P61968 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC5.47□□□□□ -1.53
LMO4P61968 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
LMO4P61968 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
LMO4P61968 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC5.46□□□□□ -1.53
LMO4P61968 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
LMO4P61968 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
LMO4P61968 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.46□□□□□ -1.53
LMO4P61968 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LMO4P61968 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LMO4P61968 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LMO4P61968 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
LMO4P61968 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC5.46□□□□□ -1.54
LMO4P61968 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
LMO4P61968 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
LMO4P61968 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LMO4P61968 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LMO4P61968 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LMO4P61968 SNORD35A-201ENST00000363389 86 ntBASIC5.46□□□□□ -1.54
LMO4P61968 YWHAZP4-201ENST00000392459 708 ntBASIC5.46□□□□□ -1.54
LMO4P61968 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LMO4P61968 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.46□□□□□ -1.54
LMO4P61968 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LMO4P61968 VN1R20P-201ENST00000425215 966 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 AC083862.1-201ENST00000427378 1242 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.46□□□□□ -1.54
LMO4P61968 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 IGKV1OR10-1-201ENST00000442306 329 ntBASIC5.46□□□□□ -1.54
LMO4P61968 RPSAP40-201ENST00000442343 891 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.46□□□□□ -1.54
LMO4P61968 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.46□□□□□ -1.54
LMO4P61968 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 RARRES2P3-201ENST00000457739 473 ntBASIC5.46□□□□□ -1.54
LMO4P61968 CCNJP2-201ENST00000457810 1163 ntBASIC5.46□□□□□ -1.54
LMO4P61968 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.46□□□□□ -1.54
LMO4P61968 RPL12P7-201ENST00000493832 494 ntBASIC5.46□□□□□ -1.54
LMO4P61968 RN7SL362P-201ENST00000494228 267 ntBASIC5.46□□□□□ -1.54
LMO4P61968 H3F3AP3-201ENST00000497682 407 ntBASIC5.46□□□□□ -1.54
LMO4P61968 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 AC113367.2-201ENST00000505749 160 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AC112484.3-201ENST00000505910 329 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AC018797.1-201ENST00000510791 255 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AC008429.2-201ENST00000523057 864 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 OR7E158P-201ENST00000524483 910 ntBASIC5.46□□□□□ -1.54
LMO4P61968 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.46□□□□□ -1.54
LMO4P61968 BCAS2P1-201ENST00000528022 632 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.46□□□□□ -1.54
LMO4P61968 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.46□□□□□ -1.54
LMO4P61968 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LMO4P61968 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.46□□□□□ -1.54
LMO4P61968 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LMO4P61968 AC026898.1-201ENST00000586404 571 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 AC090953.1-201ENST00000604305 1092 ntBASIC5.46□□□□□ -1.54
LMO4P61968 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.46□□□□□ -1.54
LMO4P61968 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.46□□□□□ -1.54
LMO4P61968 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.46□□□□□ -1.54
LMO4P61968 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.46□□□□□ -1.54
LMO4P61968 MIR6721-201ENST00000617181 87 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AL157762.1-201ENST00000619612 415 ntBASIC5.46□□□□□ -1.54
LMO4P61968 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AL109924.4-201ENST00000623089 670 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AC114546.4-201ENST00000624413 369 ntBASIC5.46□□□□□ -1.54
LMO4P61968 AC005839.1-201ENST00000624148 3213 ntBASIC5.46□□□□□ -1.54
LMO4P61968 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LMO4P61968 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.46□□□□□ -1.54
LMO4P61968 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LMO4P61968 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LMO4P61968 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
LMO4P61968 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LMO4P61968 AC022613.3-201ENST00000560740 1346 ntBASIC5.46□□□□□ -1.54
LMO4P61968 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LMO4P61968 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 AF131215.2-201ENST00000531549 1710 ntBASIC5.45□□□□□ -1.54
LMO4P61968 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LMO4P61968 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 BRD7P1-201ENST00000557705 1915 ntBASIC5.45□□□□□ -1.54
LMO4P61968 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms