Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 AC020656.2-201ENST00000613291 5309 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 RPL12P13-201ENST00000310055 497 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 RPL10P16-201ENST00000325000 645 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 RNA5SP172-201ENST00000365061 118 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 FAM204BP-201ENST00000369171 701 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 HIST1H2BPS2-201ENST00000402707 340 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 IGLC6-201ENST00000410078 317 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC002524.1-201ENST00000411687 547 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC009413.1-201ENST00000414823 399 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 RPSAP60-201ENST00000415403 880 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 FTOP1-201ENST00000419363 861 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC113412.1-201ENST00000425840 504 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC4.72□□□□□ -1.65
CKS1BP61024 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 CDK7P1-201ENST00000434574 693 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 FDPSP8-201ENST00000438304 1089 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC108039.2-201ENST00000440214 359 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC4.72□□□□□ -1.65
CKS1BP61024 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
CKS1BP61024 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 AC097263.1-201ENST00000496795 606 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 H3F3AP3-201ENST00000497682 407 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.72□□□□□ -1.65
CKS1BP61024 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC4.72□□□□□ -1.65
CKS1BP61024 AC008496.1-201ENST00000509131 295 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC008417.1-201ENST00000510014 565 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC4.72□□□□□ -1.65
CKS1BP61024 SCARNA20.3-201ENST00000516913 131 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC4.72□□□□□ -1.65
CKS1BP61024 AC090539.2-201ENST00000523425 671 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC4.72□□□□□ -1.65
CKS1BP61024 AP003041.2-201ENST00000525666 1180 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC4.72□□□□□ -1.65
CKS1BP61024 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC4.72□□□□□ -1.65
CKS1BP61024 ATP5J2P4-201ENST00000538774 267 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.72□□□□□ -1.65
CKS1BP61024 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC4.72□□□□□ -1.65
CKS1BP61024 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC4.72□□□□□ -1.65
CKS1BP61024 AC092375.1-201ENST00000550410 637 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 OR4N3P-201ENST00000559395 818 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC012181.2-201ENST00000570210 699 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC4.72□□□□□ -1.65
CKS1BP61024 AC010503.3-201ENST00000594355 540 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AL035417.2-201ENST00000603887 796 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC008385.1-201ENST00000604421 355 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC4.72□□□□□ -1.65
CKS1BP61024 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 AC135068.4-201ENST00000622949 925 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC004836.1-201ENST00000623032 634 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC4.72□□□□□ -1.65
CKS1BP61024 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 OGFOD1P1-201ENST00000447552 1592 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 AC011369.2-201ENST00000624423 1567 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 MTCO1P25-201ENST00000414449 1799 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CKS1BP61024 TNPO1P2-201ENST00000426249 2665 ntBASIC4.72□□□□□ -1.65
CKS1BP61024 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CKS1BP61024 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.72□□□□□ -1.65
CKS1BP61024 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CKS1BP61024 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CKS1BP61024 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CKS1BP61024 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CKS1BP61024 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.65
CKS1BP61024 AL034546.1-201ENST00000623740 3693 ntBASIC4.71□□□□□ -1.65
CKS1BP61024 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CKS1BP61024 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CKS1BP61024 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.71□□□□□ -1.65
CKS1BP61024 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 C1D-202ENST00000407324 1379 ntTSL 3 BASIC4.71□□□□□ -1.66
CKS1BP61024 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CKS1BP61024 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CKS1BP61024 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CKS1BP61024 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CKS1BP61024 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CKS1BP61024 RNA5SP296-201ENST00000410523 111 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC4.71□□□□□ -1.66
CKS1BP61024 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC4.71□□□□□ -1.66
CKS1BP61024 NQO1-204ENST00000439109 924 ntTSL 2 BASIC4.71□□□□□ -1.66
CKS1BP61024 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC4.71□□□□□ -1.66
CKS1BP61024 RPSAP49-201ENST00000445182 886 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms