Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC068726.1-201ENST00000610993 341 ntBASIC7.52□□□□□ -1.21
CIITAP33076 AC004241.2-201ENST00000614562 444 ntBASIC7.52□□□□□ -1.21
CIITAP33076 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.52□□□□□ -1.21
CIITAP33076 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.52□□□□□ -1.21
CIITAP33076 AC073488.9-201ENST00000631601 754 ntBASIC7.52□□□□□ -1.21
CIITAP33076 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CIITAP33076 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CIITAP33076 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CIITAP33076 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.52□□□□□ -1.21
CIITAP33076 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CIITAP33076 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CIITAP33076 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.52□□□□□ -1.21
CIITAP33076 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CIITAP33076 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CIITAP33076 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CIITAP33076 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CIITAP33076 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CIITAP33076 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CIITAP33076 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CIITAP33076 AL117339.4-201ENST00000608335 7063 ntBASIC7.51□□□□□ -1.21
CIITAP33076 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.51□□□□□ -1.21
CIITAP33076 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.51□□□□□ -1.21
CIITAP33076 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.51□□□□□ -1.21
CIITAP33076 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 MAPK10-323ENST00000641493 3207 ntBASIC7.51□□□□□ -1.21
CIITAP33076 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.51□□□□□ -1.21
CIITAP33076 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CIITAP33076 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CIITAP33076 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CIITAP33076 U3.52-201ENST00000384034 216 ntBASIC7.51□□□□□ -1.21
CIITAP33076 AL049697.3-201ENST00000406493 982 ntBASIC7.51□□□□□ -1.21
CIITAP33076 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.51□□□□□ -1.21
CIITAP33076 ARL4AP4-201ENST00000434170 518 ntBASIC7.51□□□□□ -1.21
CIITAP33076 AC092106.2-201ENST00000436597 487 ntBASIC7.51□□□□□ -1.21
CIITAP33076 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.51□□□□□ -1.21
CIITAP33076 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 AC093870.1-201ENST00000506837 213 ntBASIC7.51□□□□□ -1.21
CIITAP33076 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.51□□□□□ -1.21
CIITAP33076 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.51□□□□□ -1.21
CIITAP33076 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.51□□□□□ -1.21
CIITAP33076 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.51□□□□□ -1.21
CIITAP33076 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.51□□□□□ -1.21
CIITAP33076 AL049840.5-201ENST00000602827 552 ntBASIC7.51□□□□□ -1.21
CIITAP33076 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.51□□□□□ -1.21
CIITAP33076 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.51□□□□□ -1.21
CIITAP33076 AC005393.1-201ENST00000617916 584 ntBASIC7.51□□□□□ -1.21
CIITAP33076 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.51□□□□□ -1.21
CIITAP33076 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.51□□□□□ -1.21
CIITAP33076 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CIITAP33076 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 AC105114.1-201ENST00000624795 1862 ntBASIC7.51□□□□□ -1.21
CIITAP33076 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
CIITAP33076 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CIITAP33076 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.51□□□□□ -1.21
CIITAP33076 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.5□□□□□ -1.21
CIITAP33076 AC217777.1-201ENST00000570034 1471 ntBASIC7.5□□□□□ -1.21
CIITAP33076 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CIITAP33076 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CIITAP33076 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
CIITAP33076 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.5□□□□□ -1.21
CIITAP33076 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 MRPS21P5-201ENST00000417885 231 ntBASIC7.5□□□□□ -1.21
CIITAP33076 YY1P1-201ENST00000427625 668 ntBASIC7.5□□□□□ -1.21
CIITAP33076 GAPDHP19-201ENST00000431768 1005 ntBASIC7.5□□□□□ -1.21
CIITAP33076 RPL12P49-201ENST00000441100 121 ntBASIC7.5□□□□□ -1.21
CIITAP33076 AL020997.1-201ENST00000446554 349 ntBASIC7.5□□□□□ -1.21
CIITAP33076 TVP23CP1-201ENST00000450317 639 ntBASIC7.5□□□□□ -1.21
CIITAP33076 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC7.5□□□□□ -1.21
CIITAP33076 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 AC015524.1-201ENST00000491585 472 ntBASIC7.5□□□□□ -1.21
CIITAP33076 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.5□□□□□ -1.21
CIITAP33076 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.5□□□□□ -1.21
CIITAP33076 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.5□□□□□ -1.21
CIITAP33076 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.5□□□□□ -1.21
CIITAP33076 RN7SL66P-201ENST00000582099 264 ntBASIC7.5□□□□□ -1.21
CIITAP33076 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.5□□□□□ -1.21
CIITAP33076 AL008582.1-201ENST00000609612 442 ntBASIC7.5□□□□□ -1.21
CIITAP33076 GAPDHP41-201ENST00000613707 975 ntBASIC7.5□□□□□ -1.21
CIITAP33076 MIR6813-201ENST00000621638 56 ntBASIC7.5□□□□□ -1.21
CIITAP33076 AC114546.4-201ENST00000624413 369 ntBASIC7.5□□□□□ -1.21
CIITAP33076 AC068213.1-201ENST00000625124 226 ntBASIC7.5□□□□□ -1.21
CIITAP33076 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 EPS15P1-202ENST00000459691 2071 ntBASIC7.5□□□□□ -1.21
CIITAP33076 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 AL021877.2-201ENST00000624442 10684 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms