Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL445528.1-201ENST00000426330 420 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.99□□□□□ -1.13
CNGA1P29973 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.99□□□□□ -1.13
CNGA1P29973 AC234771.2-201ENST00000445718 597 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.99□□□□□ -1.13
CNGA1P29973 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 RPS26P11-201ENST00000463445 348 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 AC026336.1-201ENST00000466577 351 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 RPS26P6-201ENST00000475156 348 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNGA1P29973 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC7.99□□□□□ -1.13
CNGA1P29973 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.99□□□□□ -1.13
CNGA1P29973 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 OR4A41P-201ENST00000533053 928 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 OR9G2P-201ENST00000533326 880 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
CNGA1P29973 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.99□□□□□ -1.13
CNGA1P29973 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.99□□□□□ -1.13
CNGA1P29973 EIF4A3P1-201ENST00000578499 647 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 AC015801.1-201ENST00000585651 153 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNGA1P29973 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.99□□□□□ -1.13
CNGA1P29973 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.99□□□□□ -1.13
CNGA1P29973 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.99□□□□□ -1.13
CNGA1P29973 PCA3_2.1-201ENST00000612507 409 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 MIR6778-201ENST00000617912 73 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 MIR6806-201ENST00000622141 64 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 RPSAP68-201ENST00000625020 438 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 AC068213.1-201ENST00000625124 226 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 AC010401.2-201ENST00000575137 4934 ntBASIC7.99□□□□□ -1.13
CNGA1P29973 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNGA1P29973 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNGA1P29973 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNGA1P29973 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CNGA1P29973 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.99□□□□□ -1.13
CNGA1P29973 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNGA1P29973 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
CNGA1P29973 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.99□□□□□ -1.13
CNGA1P29973 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.99□□□□□ -1.13
CNGA1P29973 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CNGA1P29973 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
CNGA1P29973 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 AC092821.2-201ENST00000545710 2042 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CNGA1P29973 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 RNA5SP308-201ENST00000362532 115 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 RNA5SP232-201ENST00000364144 119 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 UBTFL2-201ENST00000411859 1191 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 GEMIN2P2-201ENST00000418195 715 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.98□□□□□ -1.13
CNGA1P29973 CDC42P6-201ENST00000421246 576 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.98□□□□□ -1.13
CNGA1P29973 RCC2P2-201ENST00000422174 918 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.98□□□□□ -1.13
CNGA1P29973 AC018804.1-201ENST00000430381 618 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.98□□□□□ -1.13
CNGA1P29973 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.98□□□□□ -1.13
CNGA1P29973 RPL23P10-201ENST00000468780 412 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 PPP1R2P6-201ENST00000478565 588 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 RN7SL170P-201ENST00000487098 295 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 SCARNA6-201ENST00000515982 265 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 SNORA26.10-201ENST00000516427 141 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 RPL10P18-201ENST00000519384 309 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 ST13P6-201ENST00000522430 1102 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.98□□□□□ -1.13
CNGA1P29973 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC7.98□□□□□ -1.13
CNGA1P29973 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.98□□□□□ -1.13
CNGA1P29973 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.98□□□□□ -1.13
CNGA1P29973 AC020978.7-201ENST00000575953 1187 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.98□□□□□ -1.13
CNGA1P29973 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC7.98□□□□□ -1.13
CNGA1P29973 AC144521.1-201ENST00000607148 956 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 AP005329.3-201ENST00000609924 686 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 AL356490.1-201ENST00000623079 479 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 AL683826.1-201ENST00000624104 627 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 AC217777.1-201ENST00000570034 1471 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
CNGA1P29973 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
CNGA1P29973 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
CNGA1P29973 AC011592.1-201ENST00000624647 3634 ntBASIC7.98□□□□□ -1.13
CNGA1P29973 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CNGA1P29973 AC061975.7-201ENST00000592016 2692 ntBASIC7.97□□□□□ -1.13
CNGA1P29973 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CNGA1P29973 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms