Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SNORD91A-202ENST00000609620 191 ntBASIC7.19□□□□□ -1.26
RB1P06400 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.19□□□□□ -1.26
RB1P06400 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RB1P06400 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.19□□□□□ -1.26
RB1P06400 PSMC1P6-201ENST00000477233 1319 ntBASIC7.19□□□□□ -1.26
RB1P06400 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
RB1P06400 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.18□□□□□ -1.26
RB1P06400 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RB1P06400 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RB1P06400 UGT2B25P-201ENST00000511504 1586 ntBASIC7.18□□□□□ -1.26
RB1P06400 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RB1P06400 RN7SKP275-201ENST00000364626 301 ntBASIC7.18□□□□□ -1.26
RB1P06400 RBBP4P4-201ENST00000398588 1289 ntBASIC7.18□□□□□ -1.26
RB1P06400 AL359694.1-201ENST00000403247 604 ntBASIC7.18□□□□□ -1.26
RB1P06400 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.18□□□□□ -1.26
RB1P06400 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.18□□□□□ -1.26
RB1P06400 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RB1P06400 AC110602.1-201ENST00000437414 318 ntBASIC7.18□□□□□ -1.26
RB1P06400 HMGN1P6-201ENST00000438508 291 ntBASIC7.18□□□□□ -1.26
RB1P06400 GAPDHP33-201ENST00000443168 1013 ntBASIC7.18□□□□□ -1.26
RB1P06400 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.18□□□□□ -1.26
RB1P06400 HMGB1P7-201ENST00000450921 612 ntBASIC7.18□□□□□ -1.26
RB1P06400 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.18□□□□□ -1.26
RB1P06400 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC7.18□□□□□ -1.26
RB1P06400 AC096743.1-201ENST00000485172 319 ntBASIC7.18□□□□□ -1.26
RB1P06400 AC108103.1-201ENST00000511286 446 ntBASIC7.18□□□□□ -1.26
RB1P06400 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.18□□□□□ -1.26
RB1P06400 EEF1B2P2-201ENST00000519625 676 ntBASIC7.18□□□□□ -1.26
RB1P06400 PTTG3P-201ENST00000521862 606 ntBASIC7.18□□□□□ -1.26
RB1P06400 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC7.18□□□□□ -1.26
RB1P06400 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.18□□□□□ -1.26
RB1P06400 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC7.18□□□□□ -1.26
RB1P06400 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC7.18□□□□□ -1.26
RB1P06400 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.18□□□□□ -1.26
RB1P06400 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.18□□□□□ -1.26
RB1P06400 AP002345.2-201ENST00000609961 904 ntBASIC7.18□□□□□ -1.26
RB1P06400 AC016590.3-201ENST00000611171 753 ntBASIC7.18□□□□□ -1.26
RB1P06400 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.18□□□□□ -1.26
RB1P06400 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.18□□□□□ -1.26
RB1P06400 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
RB1P06400 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RB1P06400 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RB1P06400 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RB1P06400 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.18□□□□□ -1.26
RB1P06400 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RB1P06400 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.18□□□□□ -1.26
RB1P06400 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RB1P06400 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.18□□□□□ -1.26
RB1P06400 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 AC104966.1-201ENST00000467010 1464 ntBASIC7.17□□□□□ -1.26
RB1P06400 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.17□□□□□ -1.26
RB1P06400 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
RB1P06400 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.17□□□□□ -1.26
RB1P06400 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.17□□□□□ -1.26
RB1P06400 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.17□□□□□ -1.26
RB1P06400 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RB1P06400 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RB1P06400 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.17□□□□□ -1.26
RB1P06400 AL663061.1-201ENST00000416625 580 ntBASIC7.17□□□□□ -1.26
RB1P06400 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.17□□□□□ -1.26
RB1P06400 GTF3AP6-201ENST00000432585 986 ntBASIC7.17□□□□□ -1.26
RB1P06400 GTF2IP14-201ENST00000441415 586 ntBASIC7.17□□□□□ -1.26
RB1P06400 GAPDHP16-201ENST00000448152 962 ntBASIC7.17□□□□□ -1.26
RB1P06400 AL034399.1-201ENST00000451535 380 ntBASIC7.17□□□□□ -1.26
RB1P06400 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.17□□□□□ -1.26
RB1P06400 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.17□□□□□ -1.26
RB1P06400 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.17□□□□□ -1.26
RB1P06400 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.17□□□□□ -1.26
RB1P06400 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 AC093283.1-201ENST00000565306 1075 ntBASIC7.17□□□□□ -1.26
RB1P06400 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.17□□□□□ -1.26
RB1P06400 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.17□□□□□ -1.26
RB1P06400 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.17□□□□□ -1.26
RB1P06400 AL589863.1-201ENST00000595383 631 ntBASIC7.17□□□□□ -1.26
RB1P06400 AC124916.2-201ENST00000604416 224 ntBASIC7.17□□□□□ -1.26
RB1P06400 AC093635.1-201ENST00000609028 555 ntBASIC7.17□□□□□ -1.26
RB1P06400 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RB1P06400 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.17□□□□□ -1.26
RB1P06400 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RB1P06400 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RB1P06400 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.17□□□□□ -1.26
RB1P06400 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms