Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 IGLV3-6-201ENST00000523937 250 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 NF1P12-201ENST00000549593 583 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.3□□□□□ -1.4
SCN2BO60939 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.3□□□□□ -1.4
SCN2BO60939 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.3□□□□□ -1.4
SCN2BO60939 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.3□□□□□ -1.4
SCN2BO60939 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.3□□□□□ -1.4
SCN2BO60939 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.3□□□□□ -1.4
SCN2BO60939 AC012254.5-201ENST00000623573 478 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 MIR665-201ENST00000635949 72 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.3□□□□□ -1.4
SCN2BO60939 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.3□□□□□ -1.4
SCN2BO60939 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.3□□□□□ -1.4
SCN2BO60939 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.3□□□□□ -1.4
SCN2BO60939 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.3□□□□□ -1.4
SCN2BO60939 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.3□□□□□ -1.4
SCN2BO60939 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SCN2BO60939 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SCN2BO60939 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCN2BO60939 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.29□□□□□ -1.4
SCN2BO60939 OR2A3P-202ENST00000641249 1776 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SCN2BO60939 RNU1-56P-201ENST00000391303 164 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 AL049697.3-201ENST00000406493 982 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.29□□□□□ -1.4
SCN2BO60939 RPS7P12-201ENST00000422385 582 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.29□□□□□ -1.4
SCN2BO60939 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.29□□□□□ -1.4
SCN2BO60939 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SCN2BO60939 RPS16P9-201ENST00000477220 427 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.29□□□□□ -1.4
SCN2BO60939 AC026774.2-201ENST00000513990 1098 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 OR52H2P-201ENST00000514607 902 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.29□□□□□ -1.4
SCN2BO60939 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.29□□□□□ -1.4
SCN2BO60939 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.29□□□□□ -1.4
SCN2BO60939 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.29□□□□□ -1.4
SCN2BO60939 AC069240.2-201ENST00000550242 609 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.29□□□□□ -1.4
SCN2BO60939 SETP3-201ENST00000581726 813 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.29□□□□□ -1.4
SCN2BO60939 AC012511.1-201ENST00000608140 449 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.29□□□□□ -1.4
SCN2BO60939 AC004241.2-201ENST00000614562 444 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.29□□□□□ -1.4
SCN2BO60939 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SCN2BO60939 CASC19-228ENST00000641414 1684 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 API5P1-201ENST00000424316 1510 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.29□□□□□ -1.4
SCN2BO60939 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
SCN2BO60939 AC010624.4-201ENST00000597606 1351 ntBASIC6.29□□□□□ -1.4
SCN2BO60939 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCN2BO60939 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.29□□□□□ -1.4
SCN2BO60939 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCN2BO60939 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SCN2BO60939 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCN2BO60939 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCN2BO60939 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.29□□□□□ -1.4
SCN2BO60939 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SCN2BO60939 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 QRSL1P3-201ENST00000552666 1316 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.28□□□□□ -1.4
SCN2BO60939 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SCN2BO60939 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.28□□□□□ -1.4
SCN2BO60939 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 LDHAP5-201ENST00000394996 622 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SCN2BO60939 RNU4-64P-201ENST00000410795 131 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 RN7SKP296-201ENST00000411185 341 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.28□□□□□ -1.4
SCN2BO60939 FECHP1-201ENST00000431896 1214 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.28□□□□□ -1.4
SCN2BO60939 OSTCP2-201ENST00000437956 444 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.28□□□□□ -1.4
SCN2BO60939 AL929410.2-201ENST00000451170 189 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 RPS4XP19-201ENST00000460237 736 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 RN7SL390P-201ENST00000470634 284 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 RN7SL216P-201ENST00000471607 298 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.28□□□□□ -1.4
SCN2BO60939 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.28□□□□□ -1.4
SCN2BO60939 CARSP2-201ENST00000520688 277 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
SCN2BO60939 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AC021820.1-201ENST00000525564 808 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 AP001994.1-201ENST00000527539 826 ntBASIC6.28□□□□□ -1.4
SCN2BO60939 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms