Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC010680.3-201ENST00000604215 520 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC006270.3-201ENST00000605967 1036 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 MTND5P23-201ENST00000430812 1655 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AL390195.2-201ENST00000564771 2023 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 TTTY25P-201ENST00000558356 1505 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 CREM-212ENST00000374728 1933 ntTSL 5 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 FAM3C2-201ENST00000312214 681 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 RNU6-1251P-201ENST00000364502 107 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 SNORA35-201ENST00000386104 128 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 MT-TS1-201ENST00000387416 69 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 SNORD65-201ENST00000391079 73 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 MORF4L1P1-201ENST00000404582 967 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 RNU2-65P-201ENST00000410162 185 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 EIF3IP1-201ENST00000433048 967 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 RPS28P8-201ENST00000435020 208 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 RPL6P30-201ENST00000443382 862 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AL451081.2-201ENST00000448115 933 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 RN7SL841P-201ENST00000470547 297 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC138356.2-201ENST00000521192 667 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC093524.1-201ENST00000564266 1094 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC005726.4-201ENST00000582858 458 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC005498.1-201ENST00000592125 465 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 WISP1-OT1-201ENST00000602893 642 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC092681.3-201ENST00000609463 678 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC015922.4-201ENST00000612568 690 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 MIR6726-201ENST00000613751 61 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 BX005195.1-201ENST00000618097 1198 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 USP12-203ENST00000620323 349 ntTSL 3 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC015722.2-201ENST00000622210 551 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC019278.1-201ENST00000623516 479 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 FRG1KP-201ENST00000623592 341 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 AC093768.1-201ENST00000505987 2173 ntBASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUEDC1Q9NWM3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms