Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AC116036.1-201ENST00000412199 367 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 ANXA2P2-201ENST00000435128 1020 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 LSM3P3-201ENST00000436601 306 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 RPL29P7-201ENST00000440227 457 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AL353803.3-201ENST00000444641 335 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 RPL21P33-201ENST00000444831 484 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 SCARNA18.2-201ENST00000516882 84 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 RN7SKP64-201ENST00000517206 328 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 IGHV3-57-201ENST00000520143 280 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 IGHV1-14-201ENST00000523391 241 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 OR4C1P-201ENST00000530880 937 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AC026458.1-201ENST00000564330 438 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 MIR4420-201ENST00000583944 77 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AL138960.1-201ENST00000613838 513 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 MIR6731-201ENST00000614863 72 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 U1.41-201ENST00000617626 165 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AL354718.1-201ENST00000619764 589 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 NPM1P14-201ENST00000343743 866 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 RNU12-2P-201ENST00000364789 156 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 RN7SKP55-201ENST00000364888 307 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 SNORA70.5-201ENST00000365519 135 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 LCN1P2-201ENST00000372030 223 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AL139415.1-201ENST00000424862 352 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 RPL34P27-201ENST00000428810 349 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 RPLP0P1-201ENST00000457002 361 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 RN7SL149P-201ENST00000465197 281 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AC091982.1-202ENST00000473923 343 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 RPL23AP8-201ENST00000479812 475 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 HNRNPCP8-201ENST00000528764 888 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 RN7SL697P-201ENST00000582484 299 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 MIR3159-201ENST00000584572 74 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AL352984.2-201ENST00000611153 546 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AC005393.1-201ENST00000617916 584 ntBASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.18□□□□□ -1.42
CCNB1IP1Q9NPC3 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms