Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNA5SP512-201ENST00000364550 120 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 RNA5SP77-201ENST00000365394 120 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 MRPS6P2-201ENST00000381143 370 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 PRELID1P1-201ENST00000403549 660 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 SNORA11.5-201ENST00000408163 128 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AL359885.1-201ENST00000415786 903 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AL139158.1-201ENST00000424719 340 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AL390728.3-201ENST00000452704 270 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AC019084.1-201ENST00000457337 432 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 OR13C1P-201ENST00000457612 963 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 RN7SL39P-201ENST00000462264 297 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 OR7E22P-201ENST00000478335 1035 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 SCARNA5-201ENST00000516201 276 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AC107958.1-201ENST00000556576 290 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AC244034.2-201ENST00000562504 509 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AC106785.4-201ENST00000569492 412 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AL049840.5-201ENST00000602827 552 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AL589743.6-201ENST00000611025 117 ntBASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 RNA5SP232-201ENST00000364144 119 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 RPL5P20-201ENST00000403848 896 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AL354893.1-201ENST00000433735 348 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 EEF1B2P3-201ENST00000447718 678 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 RN7SL168P-201ENST00000463821 279 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC104339.1-201ENST00000465478 348 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 HMGN1P16-201ENST00000508308 283 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC135983.3-201ENST00000528049 1226 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 SYPL1P2-201ENST00000582878 727 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC005277.2-201ENST00000617898 390 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 TSHZ2-205ENST00000626626 670 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC005702.3-201ENST00000585345 1447 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AC011379.1-201ENST00000508713 3025 ntBASIC7.16□□□□□ -1.26
NXF3Q9H4D5 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.16□□□□□ -1.26
NXF3Q9H4D5 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
NXF3Q9H4D5 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NXF3Q9H4D5 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.15□□□□□ -1.26
NXF3Q9H4D5 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NXF3Q9H4D5 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
NXF3Q9H4D5 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.15□□□□□ -1.26
NXF3Q9H4D5 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NXF3Q9H4D5 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms