Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX3Q99909 CYCSP44-201ENST00000448560 313 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX3Q99909 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX3Q99909 EIF3LP2-201ENST00000457262 807 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
SSX3Q99909 CBX5P1-201ENST00000468470 561 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX3Q99909 RPS20-202ENST00000518875 671 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX3Q99909 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX3Q99909 AP003084.1-201ENST00000524828 742 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 SAA3P-201ENST00000533267 365 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSX3Q99909 MIR5010-201ENST00000582846 120 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX3Q99909 AC009955.2-201ENST00000597288 542 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 AL078624.2-201ENST00000605063 554 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 AL121782.1-201ENST00000611242 413 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX3Q99909 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SSX3Q99909 OR7E161P-202ENST00000641994 1033 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSX3Q99909 AC116158.1-201ENST00000560231 2129 ntBASIC5.84□□□□□ -1.47
SSX3Q99909 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSX3Q99909 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSX3Q99909 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SSX3Q99909 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSX3Q99909 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SSX3Q99909 AL121839.2-201ENST00000565058 6943 ntBASIC5.84□□□□□ -1.48
SSX3Q99909 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SSX3Q99909 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SSX3Q99909 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.84□□□□□ -1.48
SSX3Q99909 AC062029.1-202ENST00000606164 3651 ntBASIC5.84□□□□□ -1.48
SSX3Q99909 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SSX3Q99909 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SSX3Q99909 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 TRIM64EP-201ENST00000531233 1307 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 AL139100.1-201ENST00000408001 498 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 RN7SKP137-201ENST00000411074 307 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX3Q99909 MEAF6P1-201ENST00000416092 327 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX3Q99909 AL592114.2-201ENST00000440142 532 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 DBIL5P2-201ENST00000443827 253 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX3Q99909 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX3Q99909 TREML3P-201ENST00000457327 501 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 RN7SL392P-201ENST00000473024 299 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 MYL6P4-201ENST00000477911 453 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 RPL21P42-201ENST00000488408 464 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.83□□□□□ -1.48
SSX3Q99909 RNU6-943P-201ENST00000516960 98 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.83□□□□□ -1.48
SSX3Q99909 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 AC096708.2-201ENST00000577676 512 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 FCGR1CP-201ENST00000579737 1127 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 RN7SL667P-201ENST00000582817 298 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 MIR4470-201ENST00000583453 72 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 MIR4420-201ENST00000583944 77 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 OR7A11P-201ENST00000597719 953 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX3Q99909 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX3Q99909 AL136985.2-201ENST00000607372 535 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 MIR8082-201ENST00000612488 81 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 AC009283.1-201ENST00000615852 645 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SSX3Q99909 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SSX3Q99909 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SSX3Q99909 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.83□□□□□ -1.48
SSX3Q99909 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSX3Q99909 AL161912.4-201ENST00000623889 2468 ntBASIC5.83□□□□□ -1.48
SSX3Q99909 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX3Q99909 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX3Q99909 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX3Q99909 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX3Q99909 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms