Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 PPP1R1AP1-201ENST00000525622 425 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 ARL2BPP2-201ENST00000550907 489 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 DIO2-211ENST00000557125 517 ntTSL 3 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 EXOSC3P2-201ENST00000594464 497 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 COX6CP4-201ENST00000605798 228 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 AL442067.1-201ENST00000613261 223 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 AL158209.2-201ENST00000619266 216 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 USP30-203ENST00000392784 2483 ntTSL 2 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 AC010643.1-201ENST00000599433 3263 ntTSL 2 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.95
LRCH3Q96II8 BNIPL-201ENST00000295294 2336 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
LRCH3Q96II8 KCTD16-202ENST00000512467 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LRCH3Q96II8 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LRCH3Q96II8 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.95
LRCH3Q96II8 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC9.15□□□□□ -0.95
LRCH3Q96II8 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC9.15□□□□□ -0.95
LRCH3Q96II8 PSG10P-201ENST00000501199 1500 ntBASIC9.15□□□□□ -0.95
LRCH3Q96II8 CCDC113-201ENST00000219299 5272 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LRCH3Q96II8 LIPC-203ENST00000414170 2968 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
LRCH3Q96II8 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
LRCH3Q96II8 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LRCH3Q96II8 UVRAG-208ENST00000532130 1831 ntTSL 2 BASIC9.15□□□□□ -0.95
LRCH3Q96II8 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 TTC39DP-201ENST00000416781 1688 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC018647.1-202ENST00000449644 1651 ntTSL 5 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 LINC01641-202ENST00000445817 1971 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 UGT2B7-203ENST00000508661 1633 ntTSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 snoZ40.1-201ENST00000364540 72 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 RNA5SP256-201ENST00000390978 113 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 RN7SKP154-201ENST00000410136 290 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 RPL21P43-201ENST00000425440 472 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 MTND3P2-201ENST00000438452 342 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 NPM1P51-201ENST00000443470 744 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC016489.1-201ENST00000461109 375 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC007537.2-201ENST00000472093 511 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 UBTFL6-201ENST00000477929 1024 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC114300.1-201ENST00000502347 280 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC018710.1-201ENST00000506509 158 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC106774.2-201ENST00000510266 406 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 OR5AQ1P-201ENST00000527596 927 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC018653.2-201ENST00000540190 238 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 LINGO1-AS1-203ENST00000560265 335 ntTSL 3 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC018697.1-202ENST00000582650 592 ntTSL 4 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC012254.4-201ENST00000588843 273 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC124864.2-201ENST00000624736 186 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 LINC01739-205ENST00000641890 573 ntBASIC9.14□□□□□ -0.95
LRCH3Q96II8 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AL033381.1-201ENST00000314040 3435 ntTSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 PIEZO2-204ENST00000538948 2671 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LRCH3Q96II8 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
LRCH3Q96II8 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms