Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CST12P-201ENST00000457644 362 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AL158068.1-201ENST00000506116 616 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AC007956.1-201ENST00000555623 542 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RIF1Q5UIP0 AL590763.1-201ENST00000398297 1545 ntBASIC6.46□□□□□ -1.37
RIF1Q5UIP0 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RIF1Q5UIP0 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
RIF1Q5UIP0 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RIF1Q5UIP0 C4BPAP1-201ENST00000415474 1893 ntBASIC6.46□□□□□ -1.37
RIF1Q5UIP0 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 MRPS17P1-201ENST00000596009 3130 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 PPIAP22-201ENST00000358455 498 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 RNU1-150P-201ENST00000362491 162 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 RN7SKP115-201ENST00000363177 317 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 IGKV1OR2-3-201ENST00000411475 288 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 AC006455.6-201ENST00000426192 893 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 RPS12P17-201ENST00000438591 377 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 PRDX1P1-201ENST00000449329 596 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 OR5M14P-201ENST00000506803 618 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 IGHV3-75-201ENST00000523951 358 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 AL162632.2-201ENST00000553933 399 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 AC037198.3-201ENST00000616754 526 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 AL391988.1-201ENST00000614747 1553 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 SPATA31C1-201ENST00000420021 3895 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 CYP2G2P-201ENST00000594920 1485 ntBASIC6.46□□□□□ -1.38
RIF1Q5UIP0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RIF1Q5UIP0 SNORA56-201ENST00000383966 129 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 PPIAP7-201ENST00000454070 489 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 PRMT5P1-201ENST00000514351 598 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AP000620.1-201ENST00000527147 504 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC068768.2-201ENST00000602352 343 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.45□□□□□ -1.38
RIF1Q5UIP0 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RIF1Q5UIP0 RPL7AP14-201ENST00000424041 802 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms