Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM4P67936 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM4P67936 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM4P67936 AC011504.1-201ENST00000623331 4103 ntBASIC7.39□□□□□ -1.23
TPM4P67936 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM4P67936 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
TPM4P67936 OR10D1P-201ENST00000355343 936 ntBASIC7.39□□□□□ -1.23
TPM4P67936 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM4P67936 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
TPM4P67936 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM4P67936 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM4P67936 DBIL5P2-201ENST00000443827 253 ntBASIC7.39□□□□□ -1.23
TPM4P67936 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM4P67936 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM4P67936 VN1R38P-201ENST00000450265 887 ntBASIC7.39□□□□□ -1.23
TPM4P67936 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.39□□□□□ -1.23
TPM4P67936 RN7SL263P-201ENST00000467969 290 ntBASIC7.39□□□□□ -1.23
TPM4P67936 AC008620.1-201ENST00000468453 592 ntBASIC7.39□□□□□ -1.23
TPM4P67936 RN7SL143P-201ENST00000496780 297 ntBASIC7.39□□□□□ -1.23
TPM4P67936 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
TPM4P67936 AC026774.2-201ENST00000513990 1098 ntBASIC7.39□□□□□ -1.23
TPM4P67936 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM4P67936 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM4P67936 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.39□□□□□ -1.23
TPM4P67936 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM4P67936 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM4P67936 BMS1P8-201ENST00000565049 1178 ntBASIC7.39□□□□□ -1.23
TPM4P67936 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM4P67936 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM4P67936 AC005070.2-201ENST00000604391 260 ntBASIC7.39□□□□□ -1.23
TPM4P67936 AC133485.6-201ENST00000624045 688 ntBASIC7.39□□□□□ -1.23
TPM4P67936 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
TPM4P67936 OR5AU1-204ENST00000641822 1197 ntBASIC7.39□□□□□ -1.23
TPM4P67936 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM4P67936 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM4P67936 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
TPM4P67936 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM4P67936 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
TPM4P67936 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM4P67936 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM4P67936 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM4P67936 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 AC093297.3-201ENST00000607056 2517 ntBASIC7.38□□□□□ -1.23
TPM4P67936 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM4P67936 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM4P67936 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 OFD1P17-201ENST00000437639 3018 ntBASIC7.38□□□□□ -1.23
TPM4P67936 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
TPM4P67936 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM4P67936 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.38□□□□□ -1.23
TPM4P67936 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM4P67936 SNRPEP5-201ENST00000425442 278 ntBASIC7.38□□□□□ -1.23
TPM4P67936 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM4P67936 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM4P67936 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM4P67936 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 AC019080.2-201ENST00000453859 394 ntBASIC7.38□□□□□ -1.23
TPM4P67936 RN7SL518P-201ENST00000491887 280 ntBASIC7.38□□□□□ -1.23
TPM4P67936 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM4P67936 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM4P67936 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.38□□□□□ -1.23
TPM4P67936 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM4P67936 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM4P67936 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM4P67936 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC7.38□□□□□ -1.23
TPM4P67936 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM4P67936 MIR4420-201ENST00000583944 77 ntBASIC7.38□□□□□ -1.23
TPM4P67936 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM4P67936 AC092032.1-201ENST00000603090 165 ntBASIC7.38□□□□□ -1.23
TPM4P67936 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM4P67936 AC017037.4-201ENST00000624526 826 ntBASIC7.38□□□□□ -1.23
TPM4P67936 SNORA16A-202ENST00000628458 135 ntBASIC7.38□□□□□ -1.23
TPM4P67936 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.38□□□□□ -1.23
TPM4P67936 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM4P67936 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM4P67936 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM4P67936 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
TPM4P67936 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM4P67936 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM4P67936 AC018765.1-201ENST00000623357 3446 ntBASIC7.37□□□□□ -1.23
TPM4P67936 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM4P67936 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM4P67936 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM4P67936 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
TPM4P67936 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM4P67936 SAMMSON-210ENST00000641260 1308 ntBASIC7.37□□□□□ -1.23
TPM4P67936 MARK2P4-201ENST00000503381 2380 ntBASIC7.37□□□□□ -1.23
TPM4P67936 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM4P67936 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM4P67936 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM4P67936 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM4P67936 LCN1P2-201ENST00000372030 223 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms