Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.48□□□□□ -1.53
LMO4P61968 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
LMO4P61968 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC5.48□□□□□ -1.53
LMO4P61968 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.48□□□□□ -1.53
LMO4P61968 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
LMO4P61968 RNA5SP77-201ENST00000365394 120 ntBASIC5.48□□□□□ -1.53
LMO4P61968 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.48□□□□□ -1.53
LMO4P61968 AL359092.1-201ENST00000417156 265 ntBASIC5.48□□□□□ -1.53
LMO4P61968 MORF4L1P5-201ENST00000433352 961 ntBASIC5.48□□□□□ -1.53
LMO4P61968 AL354893.1-201ENST00000433735 348 ntBASIC5.48□□□□□ -1.53
LMO4P61968 AC093166.3-201ENST00000448785 303 ntBASIC5.48□□□□□ -1.53
LMO4P61968 AC068491.1-201ENST00000449539 1241 ntBASIC5.48□□□□□ -1.53
LMO4P61968 RN7SL39P-201ENST00000462264 297 ntBASIC5.48□□□□□ -1.53
LMO4P61968 PGBD4P1-201ENST00000473644 407 ntBASIC5.48□□□□□ -1.53
LMO4P61968 AC005017.1-201ENST00000482002 490 ntBASIC5.48□□□□□ -1.53
LMO4P61968 AC018645.1-201ENST00000505003 109 ntBASIC5.48□□□□□ -1.53
LMO4P61968 SCARNA5-201ENST00000516201 276 ntBASIC5.48□□□□□ -1.53
LMO4P61968 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.48□□□□□ -1.53
LMO4P61968 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC5.48□□□□□ -1.53
LMO4P61968 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.48□□□□□ -1.53
LMO4P61968 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.48□□□□□ -1.53
LMO4P61968 AL049840.5-201ENST00000602827 552 ntBASIC5.48□□□□□ -1.53
LMO4P61968 AC004805.3-201ENST00000603178 310 ntBASIC5.48□□□□□ -1.53
LMO4P61968 AL122023.1-201ENST00000622847 530 ntBASIC5.48□□□□□ -1.53
LMO4P61968 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.48□□□□□ -1.53
LMO4P61968 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.48□□□□□ -1.53
LMO4P61968 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.48□□□□□ -1.53
LMO4P61968 CASC19-274ENST00000642018 970 ntBASIC5.48□□□□□ -1.53
LMO4P61968 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC5.48□□□□□ -1.53
LMO4P61968 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.48□□□□□ -1.53
LMO4P61968 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
LMO4P61968 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LMO4P61968 CASC19-205ENST00000641013 1411 ntBASIC5.48□□□□□ -1.53
LMO4P61968 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
LMO4P61968 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LMO4P61968 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.47□□□□□ -1.53
LMO4P61968 LINC02035-201ENST00000610128 5476 ntBASIC5.47□□□□□ -1.53
LMO4P61968 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC5.47□□□□□ -1.53
LMO4P61968 RN7SKP77-201ENST00000363261 353 ntBASIC5.47□□□□□ -1.53
LMO4P61968 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.47□□□□□ -1.53
LMO4P61968 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.47□□□□□ -1.53
LMO4P61968 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 RNA5SP198-201ENST00000410376 127 ntBASIC5.47□□□□□ -1.53
LMO4P61968 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.47□□□□□ -1.53
LMO4P61968 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.47□□□□□ -1.53
LMO4P61968 GTF3AP6-201ENST00000432585 986 ntBASIC5.47□□□□□ -1.53
LMO4P61968 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.47□□□□□ -1.53
LMO4P61968 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.47□□□□□ -1.53
LMO4P61968 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.47□□□□□ -1.53
LMO4P61968 H3F3AP5-201ENST00000475267 429 ntBASIC5.47□□□□□ -1.53
LMO4P61968 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 RN7SL170P-201ENST00000487098 295 ntBASIC5.47□□□□□ -1.53
LMO4P61968 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.47□□□□□ -1.53
LMO4P61968 RPL19P11-201ENST00000495944 589 ntBASIC5.47□□□□□ -1.53
LMO4P61968 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.47□□□□□ -1.53
LMO4P61968 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.47□□□□□ -1.53
LMO4P61968 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.47□□□□□ -1.53
LMO4P61968 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.47□□□□□ -1.53
LMO4P61968 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.47□□□□□ -1.53
LMO4P61968 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.47□□□□□ -1.53
LMO4P61968 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.47□□□□□ -1.53
LMO4P61968 U1.41-201ENST00000617626 165 ntBASIC5.47□□□□□ -1.53
LMO4P61968 AC005277.2-201ENST00000617898 390 ntBASIC5.47□□□□□ -1.53
LMO4P61968 AC131009.3-201ENST00000621809 287 ntBASIC5.47□□□□□ -1.53
LMO4P61968 AC120057.5-201ENST00000623840 154 ntBASIC5.47□□□□□ -1.53
LMO4P61968 AC073593.1-201ENST00000624500 411 ntBASIC5.47□□□□□ -1.53
LMO4P61968 AC022726.2-201ENST00000634673 547 ntBASIC5.47□□□□□ -1.53
LMO4P61968 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LMO4P61968 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC5.47□□□□□ -1.53
LMO4P61968 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC5.47□□□□□ -1.53
LMO4P61968 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.47□□□□□ -1.53
LMO4P61968 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LMO4P61968 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms