Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SUMO3P55854 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SUMO3P55854 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.43□□□□□ -1.38
SUMO3P55854 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SUMO3P55854 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SUMO3P55854 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SUMO3P55854 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.43□□□□□ -1.38
SUMO3P55854 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SUMO3P55854 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.43□□□□□ -1.38
SUMO3P55854 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.43□□□□□ -1.38
SUMO3P55854 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.43□□□□□ -1.38
SUMO3P55854 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SUMO3P55854 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SUMO3P55854 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SUMO3P55854 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.43□□□□□ -1.38
SUMO3P55854 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 AC090220.1-201ENST00000593078 1699 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 TPTE2P2-201ENST00000403471 1466 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SUMO3P55854 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.42□□□□□ -1.38
SUMO3P55854 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 SNORD65-201ENST00000391079 73 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 RNA5SP53-201ENST00000391299 120 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 RSL24D1P1-201ENST00000404972 493 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.42□□□□□ -1.38
SUMO3P55854 AC092570.3-201ENST00000420113 693 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 MOB1AP2-201ENST00000446060 614 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.42□□□□□ -1.38
SUMO3P55854 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.42□□□□□ -1.38
SUMO3P55854 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 RPL34P34-201ENST00000465389 354 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.42□□□□□ -1.38
SUMO3P55854 RPS26P24-201ENST00000497656 331 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 AC134698.1-201ENST00000511619 643 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.42□□□□□ -1.38
SUMO3P55854 AC026458.1-201ENST00000564330 438 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 ACTG1P15-201ENST00000570019 1063 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.42□□□□□ -1.38
SUMO3P55854 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 AL031429.2-201ENST00000602605 649 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 AC024085.1-201ENST00000604299 432 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 AL353807.4-201ENST00000604995 257 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.42□□□□□ -1.38
SUMO3P55854 AL161931.1-201ENST00000612768 246 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 AC016597.2-201ENST00000613256 341 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 AC005156.1-201ENST00000613371 573 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 AC018926.1-201ENST00000616335 435 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 MIR1264-201ENST00000616374 69 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 RN7SL126P-201ENST00000616400 299 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 RMST_5.1-201ENST00000618704 126 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
SUMO3P55854 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 AC112255.1-201ENST00000624070 2493 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 AC009166.2-201ENST00000624410 2833 ntBASIC6.42□□□□□ -1.38
SUMO3P55854 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SUMO3P55854 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms