Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 VN1R53P-201ENST00000429536 957 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AL022324.2-201ENST00000434827 780 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.45□□□□□ -1.54
CCL3L1P16619 PA2G4P1-201ENST00000442248 1197 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCL3L1P16619 AKR1D1P1-201ENST00000457236 936 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.45□□□□□ -1.54
CCL3L1P16619 RPL23AP68-201ENST00000480924 445 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AC022415.1-202ENST00000486612 523 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.45□□□□□ -1.54
CCL3L1P16619 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.45□□□□□ -1.54
CCL3L1P16619 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC5.45□□□□□ -1.54
CCL3L1P16619 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.45□□□□□ -1.54
CCL3L1P16619 AC106785.4-201ENST00000569492 412 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AP003115.1-201ENST00000569849 463 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 MIR5095-201ENST00000578844 88 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.45□□□□□ -1.54
CCL3L1P16619 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.45□□□□□ -1.54
CCL3L1P16619 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.45□□□□□ -1.54
CCL3L1P16619 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.45□□□□□ -1.54
CCL3L1P16619 AL356986.1-201ENST00000604085 341 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AL359704.2-201ENST00000604335 521 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AC004241.2-201ENST00000614562 444 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AC005277.2-201ENST00000617898 390 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AC005393.1-201ENST00000617916 584 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 AC012653.2-201ENST00000621880 420 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.45□□□□□ -1.54
CCL3L1P16619 AC073488.9-201ENST00000631601 754 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CCL3L1P16619 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCL3L1P16619 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
CCL3L1P16619 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.45□□□□□ -1.54
CCL3L1P16619 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCL3L1P16619 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.45□□□□□ -1.54
CCL3L1P16619 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
CCL3L1P16619 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCL3L1P16619 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCL3L1P16619 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCL3L1P16619 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.45□□□□□ -1.54
CCL3L1P16619 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.44□□□□□ -1.54
CCL3L1P16619 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.44□□□□□ -1.54
CCL3L1P16619 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCL3L1P16619 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CCL3L1P16619 CASC19-228ENST00000641414 1684 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 AC010894.1-201ENST00000313760 361 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 PPIAP24-201ENST00000328558 471 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.44□□□□□ -1.54
CCL3L1P16619 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 RANP6-201ENST00000413691 644 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 AL929472.1-201ENST00000417484 429 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.44□□□□□ -1.54
CCL3L1P16619 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.44□□□□□ -1.54
CCL3L1P16619 Z68868.1-201ENST00000429048 544 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 AC092106.2-201ENST00000436597 487 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 UBBP5-201ENST00000446970 266 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 TVP23CP1-201ENST00000450317 639 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 BZW1P1-201ENST00000454901 1240 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 AC026254.2-201ENST00000475295 371 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 AC063943.2-201ENST00000495697 534 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 AC113191.1-201ENST00000517759 403 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 IGHV3-57-201ENST00000520143 280 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 AC008429.2-201ENST00000523057 864 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 IGLV3-6-201ENST00000523937 250 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 OR9G2P-201ENST00000533326 880 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.44□□□□□ -1.54
CCL3L1P16619 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 BUB1P1-201ENST00000603541 607 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 AC012175.1-201ENST00000603755 531 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 AL157899.1-201ENST00000604110 936 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 AC020765.1-201ENST00000604296 328 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 AL390877.1-201ENST00000605704 214 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 AC093635.1-201ENST00000609028 555 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 AL008582.1-201ENST00000609612 442 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.44□□□□□ -1.54
CCL3L1P16619 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCL3L1P16619 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CCL3L1P16619 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms