Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 AC023632.6-201ENST00000624338 2177 ntBASIC6.71□□□□□ -1.34
PACSIN3Q9UKS6 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 RN7SKP257-201ENST00000364525 309 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 RPS3AP25-201ENST00000411660 793 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 VDAC2P3-201ENST00000430995 828 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 NIP7P1-201ENST00000433227 512 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 BZW1P1-201ENST00000454901 1240 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 RPL23AP8-201ENST00000479812 475 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 RPL5P23-201ENST00000496040 868 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC010409.2-201ENST00000505780 478 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC139103.1-201ENST00000534696 1030 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 MTCYBP27-201ENST00000555160 670 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 RN7SL42P-201ENST00000579786 294 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 RN7SL835P-201ENST00000579920 262 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC090241.1-201ENST00000587732 621 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC067852.5-201ENST00000589299 310 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC099777.1-201ENST00000603779 1070 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC112220.2-201ENST00000605513 533 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC063962.1-201ENST00000608199 521 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC008833.1-201ENST00000611633 691 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC068620.4-201ENST00000636730 1182 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AC099654.9-201ENST00000637055 678 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 WASF5P-205ENST00000428639 1455 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 AL355578.1-201ENST00000607405 1328 ntBASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PACSIN3Q9UKS6 FO082842.1-201ENST00000423552 1370 ntBASIC6.69□□□□□ -1.34
PACSIN3Q9UKS6 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PACSIN3Q9UKS6 AC073342.2-201ENST00000595842 1800 ntBASIC6.69□□□□□ -1.34
PACSIN3Q9UKS6 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
PACSIN3Q9UKS6 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PACSIN3Q9UKS6 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.69□□□□□ -1.34
PACSIN3Q9UKS6 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.69□□□□□ -1.34
PACSIN3Q9UKS6 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PACSIN3Q9UKS6 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms