Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 PRELID3BP3-201ENST00000584963 545 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 RPL7AP69-201ENST00000595306 806 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AC015819.1-201ENST00000613588 663 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AC007998.4-201ENST00000612496 2533 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AC110597.1-201ENST00000562669 3176 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AL451064.2-201ENST00000623514 1654 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 UBBP1-201ENST00000392399 473 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AL590635.1-201ENST00000406314 586 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AL033519.1-201ENST00000407266 307 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 CYCSP17-201ENST00000407870 315 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 GAPDHP20-201ENST00000444107 1007 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AC044810.1-201ENST00000480271 711 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AC026826.1-201ENST00000493002 361 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AP006587.5-201ENST00000532033 739 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AC007068.2-201ENST00000543168 395 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AC244034.2-201ENST00000562504 509 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 DIMT1P1-201ENST00000603970 763 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AL596275.2-208ENST00000641192 594 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 AC018765.1-201ENST00000623357 3446 ntBASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.98□□□□□ -1.13
CLIP2Q9UDT6 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 RNA5SP474-201ENST00000391234 90 ntBASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 MTND6P1-201ENST00000417434 424 ntBASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 GAPDHP57-201ENST00000424400 585 ntBASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 SNRPCP6-201ENST00000528310 210 ntBASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.97□□□□□ -1.13
CLIP2Q9UDT6 CTSLP2-201ENST00000580501 394 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms