Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC067852.5-201ENST00000589299 310 ntBASIC7.05□□□□□ -1.28
LMO3Q8TAP4 MIR6883-201ENST00000614952 78 ntBASIC7.05□□□□□ -1.28
LMO3Q8TAP4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.05□□□□□ -1.28
LMO3Q8TAP4 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.05□□□□□ -1.28
LMO3Q8TAP4 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LMO3Q8TAP4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LMO3Q8TAP4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LMO3Q8TAP4 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
LMO3Q8TAP4 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AC010894.1-201ENST00000313760 361 ntBASIC7.04□□□□□ -1.28
LMO3Q8TAP4 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AP003385.1-201ENST00000426387 893 ntBASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AL596268.1-201ENST00000427910 1048 ntBASIC7.04□□□□□ -1.28
LMO3Q8TAP4 ARL4AP4-201ENST00000434170 518 ntBASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 COL11A2P1-205ENST00000441798 676 ntBASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AKR1D1P1-201ENST00000457236 936 ntBASIC7.04□□□□□ -1.28
LMO3Q8TAP4 RN7SL83P-201ENST00000468131 297 ntBASIC7.04□□□□□ -1.28
LMO3Q8TAP4 RN7SL790P-201ENST00000474043 298 ntBASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AC089984.3-201ENST00000552838 363 ntBASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AC114477.1-201ENST00000605097 605 ntBASIC7.04□□□□□ -1.28
LMO3Q8TAP4 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LMO3Q8TAP4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC019178.1-201ENST00000392337 440 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AL050335.1-201ENST00000396909 869 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 RPS19P6-201ENST00000441327 433 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 CCNJP2-201ENST00000457810 1163 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 RPSAP24-201ENST00000461543 873 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 H3F3AP3-201ENST00000497682 407 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC009567.2-201ENST00000502989 349 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 RPL7AP69-201ENST00000595306 806 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC007671.1-201ENST00000616957 830 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 CFTRP2-201ENST00000634304 199 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AC004023.1-201ENST00000561473 1744 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 AL591848.4-201ENST00000567832 3472 ntBASIC7.03□□□□□ -1.28
LMO3Q8TAP4 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LMO3Q8TAP4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.28
LMO3Q8TAP4 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
LMO3Q8TAP4 AC023245.2-201ENST00000530760 2978 ntBASIC7.02□□□□□ -1.28
LMO3Q8TAP4 AC022034.1-201ENST00000512867 2156 ntBASIC7.02□□□□□ -1.29
LMO3Q8TAP4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms