Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC099654.9-201ENST00000637055 678 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 AL512662.1-201ENST00000624850 2251 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AL356317.1-201ENST00000396110 1436 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC138627.1-203ENST00000641872 1680 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.48□□□□□ -1.37
NKX6-1P78426 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 EPS15P1-202ENST00000459691 2071 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 SAMM50P1-201ENST00000455403 1399 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 AP000766.1-201ENST00000561746 4140 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.47□□□□□ -1.37
NKX6-1P78426 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AL078595.2-201ENST00000605309 1780 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.47□□□□□ -1.37
NKX6-1P78426 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NKX6-1P78426 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 AC090114.1-201ENST00000393266 448 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AL356968.2-201ENST00000412769 1257 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AL662791.3-201ENST00000413771 776 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AC020983.1-201ENST00000417063 543 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 YWHAZP5-201ENST00000419975 730 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 ARL2BPP3-201ENST00000421226 480 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.47□□□□□ -1.37
NKX6-1P78426 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AL604028.2-201ENST00000437848 788 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 PCNPP2-201ENST00000441651 455 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 AC005550.2-201ENST00000476382 318 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 RN7SL741P-201ENST00000482473 289 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AC008799.2-201ENST00000484429 647 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 RN7SL267P-201ENST00000485107 261 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 HAUS1P1-201ENST00000505275 832 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AC022826.1-201ENST00000519383 805 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AC130366.1-201ENST00000526505 1192 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.47□□□□□ -1.37
NKX6-1P78426 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AL121839.1-201ENST00000556233 1185 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 YWHAZP1-201ENST00000556286 722 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.47□□□□□ -1.37
NKX6-1P78426 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.47□□□□□ -1.37
NKX6-1P78426 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AL158211.1-201ENST00000566763 763 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.47□□□□□ -1.37
NKX6-1P78426 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.47□□□□□ -1.37
NKX6-1P78426 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.47□□□□□ -1.37
NKX6-1P78426 CUX2P1-201ENST00000606426 298 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AC063944.3-201ENST00000609969 533 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 MIR8084-201ENST00000614105 89 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 RMST_5.1-201ENST00000618704 126 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AC004808.1-201ENST00000627671 721 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AC006453.3-201ENST00000635891 377 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AC116631.1-202ENST00000640984 683 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.47□□□□□ -1.37
NKX6-1P78426 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.47□□□□□ -1.37
NKX6-1P78426 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.47□□□□□ -1.37
NKX6-1P78426 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NKX6-1P78426 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 AC011592.1-201ENST00000624647 3634 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.47□□□□□ -1.37
NKX6-1P78426 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
NKX6-1P78426 AL512353.3-201ENST00000417517 1326 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 SF3A3P1-201ENST00000446317 1477 ntBASIC6.47□□□□□ -1.37
NKX6-1P78426 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
NKX6-1P78426 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NKX6-1P78426 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.46□□□□□ -1.37
NKX6-1P78426 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NKX6-1P78426 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NKX6-1P78426 AC092725.2-201ENST00000567658 1389 ntBASIC6.46□□□□□ -1.37
NKX6-1P78426 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NKX6-1P78426 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NKX6-1P78426 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.46□□□□□ -1.37
NKX6-1P78426 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NKX6-1P78426 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
NKX6-1P78426 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms