Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
COL6A2P12110 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 AC008957.3-201ENST00000624112 2242 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.16□□□□□ -1.26
COL6A2P12110 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.16□□□□□ -1.26
COL6A2P12110 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
COL6A2P12110 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.16□□□□□ -1.26
COL6A2P12110 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
COL6A2P12110 MSRB1P1-201ENST00000396851 354 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.16□□□□□ -1.26
COL6A2P12110 AC096644.3-201ENST00000416788 338 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC7.16□□□□□ -1.26
COL6A2P12110 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC7.16□□□□□ -1.26
COL6A2P12110 AC092865.3-201ENST00000425390 1026 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AL121916.1-201ENST00000429405 308 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 MTND5P25-201ENST00000430499 799 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 RPL12P28-201ENST00000430852 489 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC091390.2-201ENST00000432573 374 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC7.16□□□□□ -1.26
COL6A2P12110 EIF2S2P2-201ENST00000447161 982 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.16□□□□□ -1.26
COL6A2P12110 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC7.16□□□□□ -1.26
COL6A2P12110 OR7E62P-201ENST00000456741 477 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 RN7SL549P-201ENST00000478997 282 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC107956.2-201ENST00000496042 454 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.16□□□□□ -1.26
COL6A2P12110 AC069306.1-201ENST00000507006 843 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.16□□□□□ -1.26
COL6A2P12110 OR7E83P-201ENST00000511021 970 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC112673.1-201ENST00000513168 575 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.16□□□□□ -1.26
COL6A2P12110 RN7SKP98-201ENST00000517070 156 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 OR7E154P-201ENST00000525174 932 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.16□□□□□ -1.26
COL6A2P12110 OR4A41P-201ENST00000533053 928 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
COL6A2P12110 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC7.16□□□□□ -1.26
COL6A2P12110 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.16□□□□□ -1.26
COL6A2P12110 RN7SL664P-201ENST00000584239 305 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC005495.1-201ENST00000586611 1211 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.16□□□□□ -1.26
COL6A2P12110 AL390058.1-201ENST00000603834 629 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.16□□□□□ -1.26
COL6A2P12110 AP004247.4-201ENST00000608484 942 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AL008582.1-201ENST00000609612 442 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AP002345.2-201ENST00000609961 904 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC004241.3-201ENST00000611728 517 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 RNU6-1192P-201ENST00000612197 107 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
COL6A2P12110 AC243830.2-201ENST00000618067 630 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 RNU6-489P-201ENST00000618289 107 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 uc_338.21-201ENST00000622458 147 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC026422.1-201ENST00000623961 452 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC079456.1-201ENST00000624010 480 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 AC068137.4-201ENST00000638485 296 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.16□□□□□ -1.26
COL6A2P12110 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 CREM-218ENST00000460270 1416 ntTSL 2 BASIC7.16□□□□□ -1.26
COL6A2P12110 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 AP000866.6-201ENST00000638898 3579 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.16□□□□□ -1.26
COL6A2P12110 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL6A2P12110 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.16□□□□□ -1.26
COL6A2P12110 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.15□□□□□ -1.26
COL6A2P12110 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.15□□□□□ -1.26
COL6A2P12110 AC012213.2-201ENST00000562917 4597 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
COL6A2P12110 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.15□□□□□ -1.26
COL6A2P12110 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
COL6A2P12110 DDX50P1-201ENST00000438163 2400 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
COL6A2P12110 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL6A2P12110 RN7SKP62-201ENST00000384539 329 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 RPL22P22-201ENST00000395439 379 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AC113608.1-201ENST00000398740 305 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 NFU1P1-201ENST00000413128 774 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 HIGD1AP15-201ENST00000416198 280 ntBASIC7.15□□□□□ -1.26
COL6A2P12110 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms