Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC243725.1-201ENST00000637164 436 ntBASIC6.34□□□□□ -1.39
SCN2BO60939 AC119674.1-217ENST00000641942 1086 ntBASIC6.34□□□□□ -1.39
SCN2BO60939 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SCN2BO60939 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.34□□□□□ -1.39
SCN2BO60939 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SCN2BO60939 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SCN2BO60939 Z95114.1-201ENST00000624264 14574 ntBASIC6.34□□□□□ -1.39
SCN2BO60939 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.34□□□□□ -1.39
SCN2BO60939 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.34□□□□□ -1.39
SCN2BO60939 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SCN2BO60939 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.34□□□□□ -1.4
SCN2BO60939 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN2BO60939 TRIM53CP-201ENST00000531490 1354 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.33□□□□□ -1.4
SCN2BO60939 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SCN2BO60939 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 STAG3L4-201ENST00000352103 530 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.33□□□□□ -1.4
SCN2BO60939 PDCL3P5-201ENST00000398028 722 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.33□□□□□ -1.4
SCN2BO60939 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.33□□□□□ -1.4
SCN2BO60939 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 RPL6P21-201ENST00000418672 846 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.33□□□□□ -1.4
SCN2BO60939 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
SCN2BO60939 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN2BO60939 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.33□□□□□ -1.4
SCN2BO60939 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.33□□□□□ -1.4
SCN2BO60939 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
SCN2BO60939 MTND6P8-201ENST00000503471 522 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SCN2BO60939 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN2BO60939 OR52K3P-201ENST00000531655 943 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 MIR4800-201ENST00000537353 80 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.33□□□□□ -1.4
SCN2BO60939 MIR5682-201ENST00000584864 76 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 AC011921.2-201ENST00000589465 152 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN2BO60939 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN2BO60939 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN2BO60939 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.33□□□□□ -1.4
SCN2BO60939 AC063952.1-203ENST00000634410 658 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 AL591848.4-201ENST00000567832 3472 ntBASIC6.33□□□□□ -1.4
SCN2BO60939 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN2BO60939 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.33□□□□□ -1.4
SCN2BO60939 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN2BO60939 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN2BO60939 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SCN2BO60939 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SCN2BO60939 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN2BO60939 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 ZNF806-201ENST00000438300 1774 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 CUBNP3-201ENST00000457461 1784 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN2BO60939 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
SCN2BO60939 RNA5SP474-201ENST00000391234 90 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 RN7SKP268-201ENST00000411107 316 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 AL353626.3-201ENST00000413399 657 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 AL662791.3-201ENST00000413771 776 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN2BO60939 NPM1P25-201ENST00000429734 854 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 AL590128.1-201ENST00000433407 286 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 AL451136.1-201ENST00000435399 325 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 AC009518.3-201ENST00000438972 253 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.32□□□□□ -1.4
SCN2BO60939 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.32□□□□□ -1.4
SCN2BO60939 AC133965.1-201ENST00000452984 354 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN2BO60939 PHBP2-201ENST00000532859 806 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN2BO60939 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN2BO60939 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN2BO60939 WDR45BP1-201ENST00000583470 1029 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN2BO60939 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms