Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 CREM-216ENST00000429130 1476 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 OFD1P17-201ENST00000437639 3018 ntBASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AL662795.2-201ENST00000624252 3706 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC022905.1-201ENST00000503430 3048 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AP002800.1-201ENST00000624982 2225 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 OR10D1P-201ENST00000355343 936 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 RNA5SP65-201ENST00000363166 119 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 PDCL3P5-201ENST00000398028 722 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AL161742.1-201ENST00000418154 584 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 BMP6P1-201ENST00000431230 679 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 LDHAP2-201ENST00000437325 985 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 NMNAT1P3-201ENST00000457517 888 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL379P-201ENST00000479912 293 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL518P-201ENST00000491887 280 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 RPL7L1P7-201ENST00000509986 724 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC011352.2-201ENST00000514574 1016 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 MIR4800-201ENST00000537353 80 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC126323.4-201ENST00000566935 234 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL42P-201ENST00000579786 294 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 ACTG1P22-201ENST00000603793 1099 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC091768.1-201ENST00000609258 930 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 U1.41-201ENST00000617626 165 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC103564.3-201ENST00000621194 220 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC007347.2-201ENST00000623044 180 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC119674.1-204ENST00000641348 1343 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AKAP17BP-201ENST00000431706 2719 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC093844.1-201ENST00000514910 1361 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF402P-201ENST00000404435 3100 ntBASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DRB4X5D2U9 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 AC087392.3-202ENST00000358446 1754 ntBASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SKP137-201ENST00000411074 307 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms