Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 RN7SL711P-201ENST00000579731 299 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AFMID-214ENST00000591952 582 ntTSL 2 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC068020.1-201ENST00000594215 661 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AC130352.1-201ENST00000602979 661 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 BNIP3P4-201ENST00000604946 565 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 AL662797.3-201ENST00000607476 773 ntBASIC8.15□□□□□ -1.1
USB1Q9BQ65 ASNSD1-207ENST00000607535 579 ntTSL 3 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 HIST1H4D-201ENST00000614247 312 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 LAMTOR5-AS1-236ENST00000626261 464 ntTSL 5 BASIC8.15□□□□□ -1.1
USB1Q9BQ65 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 OPTN-205ENST00000378757 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
USB1Q9BQ65 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
USB1Q9BQ65 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC8.15□□□□□ -1.11
USB1Q9BQ65 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
USB1Q9BQ65 RBM26-AS1-201ENST00000456602 1756 ntTSL 2 BASIC8.15□□□□□ -1.11
USB1Q9BQ65 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC8.15□□□□□ -1.11
USB1Q9BQ65 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 ENTPD1-210ENST00000543964 1579 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 WBP11P1-202ENST00000567636 2972 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC138915.3-201ENST00000562908 1389 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 FMN1-203ENST00000558197 4060 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 GALK2-203ENST00000544523 1950 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 RNA5SP349-201ENST00000363743 109 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 S100A8-201ENST00000368732 495 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 RNU6-1263P-201ENST00000384601 106 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 AL356432.1-201ENST00000405809 419 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 RN7SKP59-201ENST00000410520 314 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 MED15P4-201ENST00000417579 393 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 FYTTD1P1-201ENST00000424250 921 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 ACTR3P2-201ENST00000439585 1257 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 SDCBPP1-201ENST00000440192 890 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC243962.1-201ENST00000441512 579 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 LHFPL3-AS2-201ENST00000453666 923 ntTSL 3 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 RPL38P1-201ENST00000460914 211 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 RN7SL449P-201ENST00000464937 286 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 ST13P14-201ENST00000474095 734 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC091805.1-201ENST00000498395 342 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC010486.1-201ENST00000511793 424 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC108120.2-201ENST00000512973 294 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC021915.1-201ENST00000522541 824 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC083923.1-201ENST00000523708 376 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 OR7E8P-201ENST00000532847 1000 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC087798.1-201ENST00000547882 534 ntTSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC120045.1-202ENST00000567770 1068 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 RN7SL138P-201ENST00000577405 287 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 VN1R80P-201ENST00000597126 338 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AL133255.1-201ENST00000606374 441 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 Metazoa_SRP.101-201ENST00000611704 303 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 AL354718.2-201ENST00000618030 371 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AP000590.1-201ENST00000624943 464 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 NELFE-214ENST00000625905 111 ntTSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms