Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 REG1CP-206ENST00000447469 496 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC013429.1-201ENST00000456604 422 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 RN7SL688P-201ENST00000471754 275 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 MYL6P4-201ENST00000477911 453 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 RN7SL516P-201ENST00000496127 297 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 RN7SL143P-201ENST00000496780 297 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC106785.4-201ENST00000569492 412 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 OOSP1P2-201ENST00000579644 351 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 MIR5192-201ENST00000579892 92 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC090699.1-201ENST00000586264 321 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC025171.4-201ENST00000607250 1047 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC110769.3-201ENST00000624567 1173 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 OR7E161P-202ENST00000641994 1033 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.94□□□□□ -1.62
NUP35Q8NFH5 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP35Q8NFH5 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC018628.1-201ENST00000624147 3819 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC105235.1-201ENST00000623208 1816 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 GNG5P2-201ENST00000372054 207 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 SMARCE1P6-201ENST00000398372 1216 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AL035467.1-201ENST00000403583 686 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 CYCSP17-201ENST00000407870 315 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 IGLC6-201ENST00000410078 317 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 RPL23AP34-201ENST00000423483 410 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AL606752.1-201ENST00000435442 666 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC018892.2-201ENST00000457656 693 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 BX323845.2-201ENST00000458382 234 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 CR383656.1-201ENST00000484916 377 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 RN7SL849P-201ENST00000485236 295 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 RPL23AP80-201ENST00000495605 424 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 RNA5SP422-201ENST00000516778 111 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 IGKV2OR22-4-201ENST00000523309 367 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 GTF2IP11-201ENST00000526931 420 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AP006587.2-201ENST00000530696 493 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC025252.2-201ENST00000537470 502 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC090971.3-201ENST00000557871 1041 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AL157899.1-201ENST00000604110 936 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC4.93□□□□□ -1.62
NUP35Q8NFH5 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP35Q8NFH5 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms