Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 Y_RNA.553-201ENST00000384670 102 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 PKMP3-201ENST00000405497 715 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 GLUD1P9-201ENST00000420997 1173 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 FTH1P5-201ENST00000425761 545 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 DPRXP1-201ENST00000426312 460 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 RPS7P2-201ENST00000435134 607 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AL161454.1-201ENST00000446226 569 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 GAPDHP16-201ENST00000448152 962 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 EPS15P1-201ENST00000448836 336 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 OSTCP1-201ENST00000455507 450 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC013787.1-201ENST00000460165 307 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 CREM-220ENST00000463314 964 ntTSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC008379.1-201ENST00000463655 464 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 RPS17P11-201ENST00000474297 293 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC011037.1-201ENST00000483964 558 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 FTH1P23-201ENST00000492727 550 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC010374.1-201ENST00000503762 1237 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 ADI1P2-201ENST00000514945 429 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 EIF1P4-201ENST00000572664 335 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 RN7SL311P-201ENST00000579858 306 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC016629.2-201ENST00000597341 199 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC093063.1-201ENST00000599317 363 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AL031985.2-201ENST00000600955 480 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AC005034.5-201ENST00000604219 466 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AL163642.2-201ENST00000604722 1019 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AP000436.1-201ENST00000605239 800 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AL109618.2-201ENST00000605527 211 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 MAPK10-281ENST00000641170 3070 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 RPL12P38-202ENST00000588627 2319 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 SALL1P1-201ENST00000438101 3837 ntBASIC7.02□□□□□ -1.29
ATG4DQ86TL0 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ATG4DQ86TL0 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ATG4DQ86TL0 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.01□□□□□ -1.29
ATG4DQ86TL0 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.01□□□□□ -1.29
ATG4DQ86TL0 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
ATG4DQ86TL0 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ATG4DQ86TL0 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ATG4DQ86TL0 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
ATG4DQ86TL0 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms