Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.51□□□□□ -1.37
RIF1Q5UIP0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AC235565.1-201ENST00000456962 1325 ntBASIC6.5□□□□□ -1.37
RIF1Q5UIP0 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 RN7SL180P-201ENST00000466769 294 ntBASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AL022100.1-202ENST00000421214 548 ntBASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AC066616.1-201ENST00000486795 413 ntBASIC6.5□□□□□ -1.37
RIF1Q5UIP0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AC027801.3-201ENST00000515049 698 ntBASIC6.5□□□□□ -1.37
RIF1Q5UIP0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 AC020914.7-201ENST00000594477 545 ntBASIC6.5□□□□□ -1.37
RIF1Q5UIP0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC6.5□□□□□ -1.37
RIF1Q5UIP0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 AC124045.1-201ENST00000606008 1953 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 RNU4-34P-201ENST00000410431 124 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 AC239367.3-201ENST00000428996 814 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 AL645937.3-201ENST00000453647 936 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 ATP5LP3-201ENST00000514223 304 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 RNA5SP418-201ENST00000515951 117 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 RNA5SP340-201ENST00000517132 107 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 CASC19-222ENST00000641321 1173 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 AC241584.2-201ENST00000637142 2090 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 RPS3AP2-201ENST00000407190 754 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 RPS7P12-201ENST00000422385 582 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 BX119321.1-201ENST00000428912 797 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 RPS27P18-201ENST00000431701 247 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms