Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 OR7E22P-201ENST00000478335 1035 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.51□□□□□ -1.53
LMO4P61968 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC5.51□□□□□ -1.53
LMO4P61968 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.51□□□□□ -1.53
LMO4P61968 HMGN1P16-201ENST00000508308 283 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 AC253576.1-201ENST00000511645 1156 ntBASIC5.51□□□□□ -1.53
LMO4P61968 SNORA74.1-201ENST00000516320 180 ntBASIC5.51□□□□□ -1.53
LMO4P61968 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.51□□□□□ -1.53
LMO4P61968 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.51□□□□□ -1.53
LMO4P61968 OR9L1P-201ENST00000529493 933 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.51□□□□□ -1.53
LMO4P61968 OR52K3P-201ENST00000531655 943 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.51□□□□□ -1.53
LMO4P61968 AC009729.1-201ENST00000548873 1133 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.51□□□□□ -1.53
LMO4P61968 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.51□□□□□ -1.53
LMO4P61968 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 AC007066.2-202ENST00000566531 914 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AP003115.1-201ENST00000569849 463 ntBASIC5.51□□□□□ -1.53
LMO4P61968 RN7SL230P-201ENST00000580835 303 ntBASIC5.51□□□□□ -1.53
LMO4P61968 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.51□□□□□ -1.53
LMO4P61968 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AC010333.3-201ENST00000615100 402 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AL683826.1-201ENST00000624104 627 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AC010325.3-201ENST00000641084 394 ntBASIC5.51□□□□□ -1.53
LMO4P61968 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC5.51□□□□□ -1.53
LMO4P61968 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LMO4P61968 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC5.51□□□□□ -1.53
LMO4P61968 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LMO4P61968 AC079949.2-201ENST00000617117 2933 ntBASIC5.51□□□□□ -1.53
LMO4P61968 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.5□□□□□ -1.53
LMO4P61968 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LMO4P61968 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC5.5□□□□□ -1.53
LMO4P61968 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC5.5□□□□□ -1.53
LMO4P61968 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LMO4P61968 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 AC093278.2-201ENST00000564956 2485 ntBASIC5.5□□□□□ -1.53
LMO4P61968 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LMO4P61968 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 AC124045.1-201ENST00000606008 1953 ntBASIC5.5□□□□□ -1.53
LMO4P61968 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
LMO4P61968 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LMO4P61968 RNA5SP485-201ENST00000365053 119 ntBASIC5.5□□□□□ -1.53
LMO4P61968 RNU1-84P-201ENST00000365447 164 ntBASIC5.5□□□□□ -1.53
LMO4P61968 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMO4P61968 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.5□□□□□ -1.53
LMO4P61968 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.5□□□□□ -1.53
LMO4P61968 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.5□□□□□ -1.53
LMO4P61968 TVP23CP1-201ENST00000450317 639 ntBASIC5.5□□□□□ -1.53
LMO4P61968 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.5□□□□□ -1.53
LMO4P61968 SULT1D1P-201ENST00000458020 882 ntBASIC5.5□□□□□ -1.53
LMO4P61968 RPL37P23-201ENST00000492641 294 ntBASIC5.5□□□□□ -1.53
LMO4P61968 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.5□□□□□ -1.53
LMO4P61968 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.5□□□□□ -1.53
LMO4P61968 RN7SKP70-201ENST00000516655 271 ntBASIC5.5□□□□□ -1.53
LMO4P61968 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.5□□□□□ -1.53
LMO4P61968 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.5□□□□□ -1.53
LMO4P61968 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.5□□□□□ -1.53
LMO4P61968 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.5□□□□□ -1.53
LMO4P61968 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.5□□□□□ -1.53
LMO4P61968 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.5□□□□□ -1.53
LMO4P61968 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.5□□□□□ -1.53
LMO4P61968 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.5□□□□□ -1.53
LMO4P61968 AC244034.2-201ENST00000562504 509 ntBASIC5.5□□□□□ -1.53
LMO4P61968 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.5□□□□□ -1.53
LMO4P61968 AC106785.4-201ENST00000569492 412 ntBASIC5.5□□□□□ -1.53
LMO4P61968 OR1E3-201ENST00000575608 948 ntBASIC5.5□□□□□ -1.53
LMO4P61968 AC133552.4-201ENST00000576103 676 ntBASIC5.5□□□□□ -1.53
LMO4P61968 SYPL1P2-201ENST00000582878 727 ntBASIC5.5□□□□□ -1.53
LMO4P61968 AC011921.2-201ENST00000589465 152 ntBASIC5.5□□□□□ -1.53
LMO4P61968 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.5□□□□□ -1.53
LMO4P61968 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.5□□□□□ -1.53
LMO4P61968 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.5□□□□□ -1.53
LMO4P61968 AC103798.2-201ENST00000624292 632 ntBASIC5.5□□□□□ -1.53
LMO4P61968 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.5□□□□□ -1.53
LMO4P61968 AC073488.9-201ENST00000631601 754 ntBASIC5.5□□□□□ -1.53
LMO4P61968 AL121936.2-201ENST00000641935 662 ntBASIC5.5□□□□□ -1.53
LMO4P61968 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
LMO4P61968 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms