Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.26□□□□□ -1.25
SSR1P43307 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SSR1P43307 MIR1231-201ENST00000408101 92 ntBASIC7.26□□□□□ -1.25
SSR1P43307 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.26□□□□□ -1.25
SSR1P43307 RPSAP60-201ENST00000415403 880 ntBASIC7.26□□□□□ -1.25
SSR1P43307 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.26□□□□□ -1.25
SSR1P43307 CHCHD3P1-201ENST00000425516 676 ntBASIC7.26□□□□□ -1.25
SSR1P43307 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.26□□□□□ -1.25
SSR1P43307 RPL14P5-201ENST00000436474 730 ntBASIC7.26□□□□□ -1.25
SSR1P43307 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC7.26□□□□□ -1.25
SSR1P43307 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.26□□□□□ -1.25
SSR1P43307 SCARNA18.2-201ENST00000516882 84 ntBASIC7.26□□□□□ -1.25
SSR1P43307 AC100854.1-201ENST00000520351 341 ntBASIC7.26□□□□□ -1.25
SSR1P43307 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.26□□□□□ -1.25
SSR1P43307 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.26□□□□□ -1.25
SSR1P43307 IGLVV-66-201ENST00000523818 341 ntBASIC7.26□□□□□ -1.25
SSR1P43307 AP001803.1-201ENST00000525668 147 ntBASIC7.26□□□□□ -1.25
SSR1P43307 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.26□□□□□ -1.25
SSR1P43307 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.26□□□□□ -1.25
SSR1P43307 AC007537.1-201ENST00000539347 327 ntBASIC7.26□□□□□ -1.25
SSR1P43307 NXPE2P1-201ENST00000543705 726 ntBASIC7.26□□□□□ -1.25
SSR1P43307 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.26□□□□□ -1.25
SSR1P43307 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.26□□□□□ -1.25
SSR1P43307 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.26□□□□□ -1.25
SSR1P43307 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.26□□□□□ -1.25
SSR1P43307 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SSR1P43307 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.26□□□□□ -1.25
SSR1P43307 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SSR1P43307 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.26□□□□□ -1.25
SSR1P43307 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.26□□□□□ -1.25
SSR1P43307 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.26□□□□□ -1.25
SSR1P43307 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
SSR1P43307 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSR1P43307 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSR1P43307 AC123769.1-201ENST00000530992 3192 ntBASIC7.25□□□□□ -1.25
SSR1P43307 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSR1P43307 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SSR1P43307 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SSR1P43307 RPL12P10-201ENST00000413498 498 ntBASIC7.25□□□□□ -1.25
SSR1P43307 CLIC4P3-201ENST00000422221 752 ntBASIC7.25□□□□□ -1.25
SSR1P43307 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.25□□□□□ -1.25
SSR1P43307 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.25□□□□□ -1.25
SSR1P43307 RPL6P24-201ENST00000445338 864 ntBASIC7.25□□□□□ -1.25
SSR1P43307 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.25□□□□□ -1.25
SSR1P43307 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.25□□□□□ -1.25
SSR1P43307 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.25□□□□□ -1.25
SSR1P43307 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.25□□□□□ -1.25
SSR1P43307 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.25□□□□□ -1.25
SSR1P43307 OR10J9P-201ENST00000511932 987 ntBASIC7.25□□□□□ -1.25
SSR1P43307 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.25□□□□□ -1.25
SSR1P43307 OR5M6P-201ENST00000530227 937 ntBASIC7.25□□□□□ -1.25
SSR1P43307 VDAC2P2-201ENST00000544463 901 ntBASIC7.25□□□□□ -1.25
SSR1P43307 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
SSR1P43307 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.25□□□□□ -1.25
SSR1P43307 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.25□□□□□ -1.25
SSR1P43307 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
SSR1P43307 AL161931.1-201ENST00000612768 246 ntBASIC7.25□□□□□ -1.25
SSR1P43307 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SSR1P43307 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SSR1P43307 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SSR1P43307 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSR1P43307 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SSR1P43307 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.25□□□□□ -1.25
SSR1P43307 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SSR1P43307 AC004014.2-201ENST00000623718 5122 ntBASIC7.25□□□□□ -1.25
SSR1P43307 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.25□□□□□ -1.25
SSR1P43307 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SSR1P43307 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SSR1P43307 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SSR1P43307 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SSR1P43307 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.24□□□□□ -1.25
SSR1P43307 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSR1P43307 AP001284.1-201ENST00000528393 2118 ntBASIC7.24□□□□□ -1.25
SSR1P43307 ASNSP6-201ENST00000592770 1618 ntBASIC7.24□□□□□ -1.25
SSR1P43307 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSR1P43307 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSR1P43307 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SSR1P43307 API5P1-201ENST00000424316 1510 ntBASIC7.24□□□□□ -1.25
SSR1P43307 OR5AQ1P-203ENST00000641818 1529 ntBASIC7.24□□□□□ -1.25
SSR1P43307 RNA5SP65-201ENST00000363166 119 ntBASIC7.24□□□□□ -1.25
SSR1P43307 MIR541-201ENST00000401360 84 ntBASIC7.24□□□□□ -1.25
SSR1P43307 AL359715.1-201ENST00000404330 555 ntBASIC7.24□□□□□ -1.25
SSR1P43307 SLC25A5P7-201ENST00000406156 896 ntBASIC7.24□□□□□ -1.25
SSR1P43307 FTH1P26-201ENST00000406512 701 ntBASIC7.24□□□□□ -1.25
SSR1P43307 NACAP7-201ENST00000407371 609 ntBASIC7.24□□□□□ -1.25
SSR1P43307 RN7SKP271-201ENST00000410528 320 ntBASIC7.24□□□□□ -1.25
SSR1P43307 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.24□□□□□ -1.25
SSR1P43307 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.24□□□□□ -1.25
SSR1P43307 ANXA2P2-201ENST00000435128 1020 ntBASIC7.24□□□□□ -1.25
SSR1P43307 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.24□□□□□ -1.25
SSR1P43307 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.24□□□□□ -1.25
SSR1P43307 AC236972.4-201ENST00000458091 963 ntBASIC7.24□□□□□ -1.25
SSR1P43307 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SSR1P43307 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms