Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 AC090774.4-201ENST00000578888 1372 ntBASIC7.35□□□□□ -1.23
TPM1P09493 AC119674.1-213ENST00000641177 1386 ntBASIC7.35□□□□□ -1.23
TPM1P09493 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.35□□□□□ -1.23
TPM1P09493 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM1P09493 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
TPM1P09493 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.35□□□□□ -1.23
TPM1P09493 AC093297.3-201ENST00000607056 2517 ntBASIC7.35□□□□□ -1.23
TPM1P09493 IMMTP1-201ENST00000435590 2219 ntBASIC7.35□□□□□ -1.23
TPM1P09493 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
TPM1P09493 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.35□□□□□ -1.23
TPM1P09493 RPS3AP5-201ENST00000389400 821 ntBASIC7.35□□□□□ -1.23
TPM1P09493 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
TPM1P09493 AC090114.1-201ENST00000393266 448 ntBASIC7.35□□□□□ -1.23
TPM1P09493 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.35□□□□□ -1.23
TPM1P09493 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM1P09493 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
TPM1P09493 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC7.35□□□□□ -1.23
TPM1P09493 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.35□□□□□ -1.23
TPM1P09493 AC018804.1-201ENST00000430381 618 ntBASIC7.35□□□□□ -1.23
TPM1P09493 PRPS1P2-201ENST00000430496 937 ntBASIC7.35□□□□□ -1.23
TPM1P09493 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM1P09493 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM1P09493 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM1P09493 AL355355.1-201ENST00000442900 793 ntBASIC7.35□□□□□ -1.23
TPM1P09493 RPL7P14-201ENST00000449851 741 ntBASIC7.35□□□□□ -1.23
TPM1P09493 GOT2P2-201ENST00000450663 1251 ntBASIC7.35□□□□□ -1.23
TPM1P09493 RN7SL815P-201ENST00000470970 290 ntBASIC7.35□□□□□ -1.23
TPM1P09493 RN7SL282P-201ENST00000479676 297 ntBASIC7.35□□□□□ -1.23
TPM1P09493 AC083906.1-201ENST00000509298 406 ntBASIC7.35□□□□□ -1.23
TPM1P09493 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM1P09493 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM1P09493 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC7.35□□□□□ -1.23
TPM1P09493 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM1P09493 RN7SL25P-201ENST00000583862 260 ntBASIC7.35□□□□□ -1.23
TPM1P09493 MIR4420-201ENST00000583944 77 ntBASIC7.35□□□□□ -1.23
TPM1P09493 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM1P09493 AL031777.2-201ENST00000611953 196 ntBASIC7.35□□□□□ -1.23
TPM1P09493 AL137246.2-201ENST00000613439 662 ntBASIC7.35□□□□□ -1.23
TPM1P09493 AC087894.3-201ENST00000623682 349 ntBASIC7.35□□□□□ -1.23
TPM1P09493 AP000577.1-201ENST00000624366 878 ntBASIC7.35□□□□□ -1.23
TPM1P09493 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM1P09493 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
TPM1P09493 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 AC102941.1-201ENST00000567616 1537 ntBASIC7.35□□□□□ -1.23
TPM1P09493 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
TPM1P09493 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM1P09493 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
TPM1P09493 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 ATP5BP1-201ENST00000411980 1574 ntBASIC7.34□□□□□ -1.23
TPM1P09493 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 AC022613.3-201ENST00000560740 1346 ntBASIC7.34□□□□□ -1.23
TPM1P09493 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.34□□□□□ -1.23
TPM1P09493 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
TPM1P09493 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 RNU4-81P-201ENST00000363561 144 ntBASIC7.34□□□□□ -1.23
TPM1P09493 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 RNA5SP53-201ENST00000391299 120 ntBASIC7.34□□□□□ -1.23
TPM1P09493 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.34□□□□□ -1.23
TPM1P09493 AL157698.1-201ENST00000415190 1011 ntBASIC7.34□□□□□ -1.23
TPM1P09493 AC007568.1-201ENST00000422912 471 ntBASIC7.34□□□□□ -1.23
TPM1P09493 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC7.34□□□□□ -1.23
TPM1P09493 AC007365.2-201ENST00000428806 458 ntBASIC7.34□□□□□ -1.23
TPM1P09493 RPL34P27-201ENST00000428810 349 ntBASIC7.34□□□□□ -1.23
TPM1P09493 AC105052.2-201ENST00000434317 794 ntBASIC7.34□□□□□ -1.23
TPM1P09493 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
TPM1P09493 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.34□□□□□ -1.23
TPM1P09493 MEF2AP1-201ENST00000454867 863 ntBASIC7.34□□□□□ -1.23
TPM1P09493 RN7SL647P-201ENST00000485429 300 ntBASIC7.34□□□□□ -1.23
TPM1P09493 RPL23AP80-201ENST00000495605 424 ntBASIC7.34□□□□□ -1.23
TPM1P09493 RN7SL182P-201ENST00000496499 300 ntBASIC7.34□□□□□ -1.23
TPM1P09493 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.34□□□□□ -1.23
TPM1P09493 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.34□□□□□ -1.23
TPM1P09493 AP001803.1-201ENST00000525668 147 ntBASIC7.34□□□□□ -1.23
TPM1P09493 OR52K3P-201ENST00000531655 943 ntBASIC7.34□□□□□ -1.23
TPM1P09493 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.34□□□□□ -1.23
TPM1P09493 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.34□□□□□ -1.23
TPM1P09493 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.34□□□□□ -1.23
TPM1P09493 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.34□□□□□ -1.23
TPM1P09493 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 COX6CP16-201ENST00000603667 216 ntBASIC7.34□□□□□ -1.23
TPM1P09493 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.34□□□□□ -1.23
TPM1P09493 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.34□□□□□ -1.23
TPM1P09493 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.34□□□□□ -1.23
TPM1P09493 U1.41-201ENST00000617626 165 ntBASIC7.34□□□□□ -1.23
TPM1P09493 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 HSPD1P8-201ENST00000400121 1658 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms