Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 CASC19-228ENST00000641414 1684 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AL121835.1-201ENST00000404250 354 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AL359715.1-201ENST00000404330 555 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 LSM5-202ENST00000409292 538 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC239367.3-201ENST00000428996 814 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 RPS13P2-201ENST00000437890 455 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC090954.1-201ENST00000445502 361 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 RN7SL263P-201ENST00000467969 290 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 TAAR3P-202ENST00000481759 1025 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC233290.1-201ENST00000553021 1186 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC090971.3-201ENST00000557871 1041 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AL031846.1-201ENST00000560933 314 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AL157899.1-201ENST00000604110 936 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC113361.1-201ENST00000606683 543 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 PART1_3.1-201ENST00000619680 131 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AL121936.2-201ENST00000641935 662 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 SHQ1P1-201ENST00000437111 1544 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 AC140134.1-201ENST00000511830 3544 ntBASIC5.73□□□□□ -1.49
HLA-DQB1P01920 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB1P01920 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AL157831.2-201ENST00000564681 3095 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC105235.1-201ENST00000623208 1816 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC005725.1-201ENST00000577346 2607 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AL049634.1-201ENST00000453770 1720 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 OR7E91P-201ENST00000400027 866 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC092651.1-201ENST00000426110 312 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AL645936.2-201ENST00000430565 928 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AL022237.1-201ENST00000446663 358 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 WBP1LP1-201ENST00000460451 896 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC091982.1-202ENST00000473923 343 ntBASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB1P01920 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms