Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL109936.2-201ENST00000605350 650 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC005383.1-201ENST00000622689 534 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 KYNUP1-201ENST00000466683 1406 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 SHQ1P1-201ENST00000437111 1544 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC129502.1-201ENST00000623261 1654 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC022613.3-201ENST00000560740 1346 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 ZNF101P1-201ENST00000435701 1720 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 RNA5SP483-201ENST00000363431 118 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 GNG5P2-201ENST00000372054 207 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 MIR181C-201ENST00000384881 110 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 NHP2P2-201ENST00000396362 460 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 RPSAP59-201ENST00000421048 890 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 OR5W1P-201ENST00000423705 938 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 GAPDHP46-201ENST00000424043 994 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC016489.1-201ENST00000461109 375 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 RPS2P25-201ENST00000467247 580 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 RPL7P17-201ENST00000470927 724 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AL355032.1-201ENST00000472981 438 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC106774.2-201ENST00000510266 406 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 HIGD1AP9-201ENST00000550710 279 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC044860.3-201ENST00000559957 368 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AP001120.4-201ENST00000590231 108 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 RN7SL760P-201ENST00000607344 270 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC093388.1-201ENST00000609166 430 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC127071.1-201ENST00000624997 712 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 AC096992.2-201ENST00000609553 1684 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 VEZF1P1-201ENST00000423931 1541 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 EEF1A1P22-201ENST00000559385 1380 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 MTCO1P25-201ENST00000414449 1799 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 NLRP3P1-201ENST00000622303 1785 ntBASIC5.01□□□□□ -1.61
HLA-DQA1P01909 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQA1P01909 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DQA1P01909 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
HLA-DQA1P01909 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQA1P01909 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
HLA-DQA1P01909 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC110373.1-201ENST00000505994 3505 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms