Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ABCA11P-202ENST00000504019 2110 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC092701.1-201ENST00000623627 1551 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AL359396.1-201ENST00000623151 2376 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 MKI67P1-201ENST00000604297 1460 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AP002833.3-201ENST00000625075 2265 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 SNORA7A-201ENST00000384765 139 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 SNORD94-201ENST00000386037 137 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 RPSAP60-201ENST00000415403 880 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AKR1B10P1-201ENST00000425765 942 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AL596268.1-201ENST00000427910 1048 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AL031681.1-201ENST00000443304 400 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 RPL7AP71-201ENST00000451120 739 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 PSMA6P2-201ENST00000457574 686 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC004890.1-201ENST00000461005 181 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC135721.2-201ENST00000464237 300 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 RN7SL379P-201ENST00000479912 293 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC010442.1-201ENST00000515583 816 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 EEF1B2P2-201ENST00000519625 676 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC019257.2-201ENST00000605539 497 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 MIR6780B-201ENST00000610307 79 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 TSHZ2-205ENST00000626626 670 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AL359195.2-201ENST00000623657 4412 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AC099654.3-201ENST00000447087 1546 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 BX322650.1-201ENST00000332359 2143 ntBASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
NPIPA3F8WFD2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 RN7SKP146-201ENST00000410242 334 ntBASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 RN7SL216P-201ENST00000471607 298 ntBASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 RN7SL741P-201ENST00000482473 289 ntBASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC084851.2-201ENST00000530377 364 ntBASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC087575.1-201ENST00000585087 229 ntBASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 PCA3_2.1-201ENST00000612507 409 ntBASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 MIR6503-201ENST00000622884 86 ntBASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
NPIPA3F8WFD2 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms