Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 B2M-204ENST00000558401 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC009053.1-202ENST00000563377 2051 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 MSS51-201ENST00000299432 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 LINC00298-201ENST00000426969 2236 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 PIWIL3-205ENST00000616349 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 OR9K2-201ENST00000305377 1122 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AL139135.1-201ENST00000412675 209 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 VTA1P1-201ENST00000414044 866 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 GTF3AP5-201ENST00000442645 697 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 NDUFB4P1-201ENST00000462398 381 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AL121769.1-201ENST00000469473 401 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC023050.1-201ENST00000498198 304 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 RN7SL104P-201ENST00000498686 293 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 HPRT1P2-201ENST00000505250 544 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 CHCHD3P2-201ENST00000550751 639 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC006530.1-201ENST00000555980 571 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AL121839.1-201ENST00000556233 1185 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 DNM1P33-201ENST00000565222 270 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC012414.6-201ENST00000568241 401 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC005498.1-201ENST00000592125 465 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC097505.1-201ENST00000610199 565 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC135050.6-202ENST00000613584 392 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 RMST_10.1-201ENST00000616309 154 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC009159.1-201ENST00000618386 642 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 AC019278.1-201ENST00000623516 479 ntBASIC10.93□□□□□ -0.66
PHF8Q9UPP1 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 CAVIN2-201ENST00000304141 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PHF8Q9UPP1 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 RNU6-1009P-201ENST00000390996 107 ntBASIC10.92□□□□□ -0.66
PHF8Q9UPP1 UBTFL2-201ENST00000411859 1191 ntBASIC10.92□□□□□ -0.66
PHF8Q9UPP1 OR52N3P-201ENST00000413417 934 ntBASIC10.92□□□□□ -0.66
PHF8Q9UPP1 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 RPL12P43-201ENST00000420608 499 ntBASIC10.92□□□□□ -0.66
PHF8Q9UPP1 ARAFP1-201ENST00000422172 605 ntBASIC10.92□□□□□ -0.66
PHF8Q9UPP1 PPIL1P1-201ENST00000423936 499 ntBASIC10.92□□□□□ -0.66
PHF8Q9UPP1 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 DDX11L10-201ENST00000430178 571 ntBASIC10.92□□□□□ -0.66
PHF8Q9UPP1 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 NIP7P1-201ENST00000433227 512 ntBASIC10.92□□□□□ -0.66
PHF8Q9UPP1 AL354983.1-201ENST00000434580 906 ntBASIC10.92□□□□□ -0.66
PHF8Q9UPP1 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
PHF8Q9UPP1 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms