Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.18□□□□□ -1.1
HMG20BQ9P0W2 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HMG20BQ9P0W2 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 RNA5SP65-201ENST00000363166 119 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AC239367.3-201ENST00000428996 814 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AC044810.1-201ENST00000480271 711 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AC117395.1-201ENST00000487390 403 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AC122713.1-201ENST00000518368 1015 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AC091304.4-201ENST00000565703 620 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AC245052.7-201ENST00000601161 359 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 OR1N1-202ENST00000619659 939 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 LPAL2-203ENST00000454031 2498 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 AC093278.2-201ENST00000564956 2485 ntBASIC8.17□□□□□ -1.1
HMG20BQ9P0W2 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 PPIAP24-201ENST00000328558 471 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AL133260.1-201ENST00000405720 405 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 NEK2P4-201ENST00000425793 1329 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 SUMO2P8-201ENST00000434672 286 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AC133965.1-201ENST00000452984 354 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 RN7SL382P-201ENST00000482631 282 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AL390198.2-201ENST00000510553 222 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AP001000.1-201ENST00000526843 742 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AL512310.3-201ENST00000547023 1335 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AC217777.1-201ENST00000570034 1471 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 AC068213.1-201ENST00000625124 226 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 MAPK10-365ENST00000641902 3825 ntBASIC8.16□□□□□ -1.1
HMG20BQ9P0W2 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 PSMC1P4-201ENST00000515236 1327 ntBASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 RN7SKP38-201ENST00000410782 309 ntBASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 AC096537.2-201ENST00000413707 714 ntBASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 GAPDHP19-201ENST00000431768 1005 ntBASIC8.15□□□□□ -1.1
HMG20BQ9P0W2 AC092106.2-201ENST00000436597 487 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms