Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AC092375.1-201ENST00000550410 637 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 ANP32BP1-202ENST00000568553 737 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 RN7SL270P-201ENST00000579643 281 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 RPL29P33-201ENST00000587474 316 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AC091133.5-201ENST00000603088 301 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AP000577.1-201ENST00000624366 878 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AL354702.2-202ENST00000641481 890 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 BRD7P6-201ENST00000431406 1860 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 MIR541-201ENST00000401360 84 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AC245452.2-201ENST00000435222 392 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 RN7SL83P-201ENST00000468131 297 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AC005519.1-201ENST00000554490 601 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AC024267.2-201ENST00000582737 417 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AC011921.2-201ENST00000589465 152 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 RPL7AP69-201ENST00000595306 806 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 MIR6885-201ENST00000612241 66 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 RAB28P4-201ENST00000622233 665 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 CLCA3P-203ENST00000490028 2781 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 MKI67P1-201ENST00000604297 1460 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 PSMC1P6-201ENST00000477233 1319 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AC122713.2-201ENST00000624942 3335 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 AC110597.1-201ENST00000562669 3176 ntBASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf40Q8IXQ3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AL137918.1-201ENST00000624542 1922 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 AC125603.4-201ENST00000621942 2699 ntBASIC6.19□□□□□ -1.42
C9orf40Q8IXQ3 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms