Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYCNQ0VAF6 CLCA3P-203ENST00000490028 2781 ntBASIC4.51□□□□□ -1.69
SYCNQ0VAF6 TTC41P-205ENST00000551270 3963 ntBASIC4.51□□□□□ -1.69
SYCNQ0VAF6 FO082842.1-201ENST00000423552 1370 ntBASIC4.51□□□□□ -1.69
SYCNQ0VAF6 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC4.51□□□□□ -1.69
SYCNQ0VAF6 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC4.51□□□□□ -1.69
SYCNQ0VAF6 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYCNQ0VAF6 NCOA4P2-201ENST00000340589 1813 ntBASIC4.51□□□□□ -1.69
SYCNQ0VAF6 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SYCNQ0VAF6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYCNQ0VAF6 CA10-204ENST00000570565 2276 ntTSL 5 BASIC4.51□□□□□ -1.69
SYCNQ0VAF6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYCNQ0VAF6 AL596244.1-201ENST00000567068 3779 ntBASIC4.51□□□□□ -1.69
SYCNQ0VAF6 DLEU2L-201ENST00000371086 3555 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 BX284613.1-201ENST00000452221 1641 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC130360.2-201ENST00000533477 1556 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 PPIAP26-201ENST00000377951 522 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 CYCSP17-201ENST00000407870 315 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 RPL31-202ENST00000409000 641 ntTSL 2 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC096537.2-201ENST00000413707 714 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AL663061.1-201ENST00000416625 580 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 NPM1P25-201ENST00000429734 854 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC018804.1-201ENST00000430381 618 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 MYO5BP3-201ENST00000431872 1279 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 PHB2P1-201ENST00000434943 890 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 GAPDHP53-201ENST00000458397 924 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 RN7SL379P-201ENST00000479912 293 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC117395.1-201ENST00000487390 403 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AL135933.1-201ENST00000498657 802 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 ENPP7P3-201ENST00000509123 241 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 RNU6-964P-201ENST00000516524 69 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC021820.1-201ENST00000525564 808 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC020914.7-201ENST00000594477 545 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC004908.1-201ENST00000606572 541 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 5S_rRNA.23-201ENST00000612086 102 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AL445647.2-201ENST00000615170 130 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC025287.2-201ENST00000621911 668 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC120057.5-201ENST00000623840 154 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC073263.3-201ENST00000624449 858 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AP002800.1-201ENST00000624982 2225 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AC102941.1-201ENST00000567616 1537 ntBASIC4.5□□□□□ -1.69
SYCNQ0VAF6 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
SYCNQ0VAF6 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYCNQ0VAF6 SAMMSON-210ENST00000641260 1308 ntBASIC4.49□□□□□ -1.69
SYCNQ0VAF6 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYCNQ0VAF6 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms