Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.46□□□□□ -1.22
TPM4P67936 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TPM4P67936 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.46□□□□□ -1.22
TPM4P67936 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.46□□□□□ -1.22
TPM4P67936 AL035410.2-201ENST00000604963 864 ntBASIC7.46□□□□□ -1.22
TPM4P67936 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.46□□□□□ -1.22
TPM4P67936 AL352984.2-202ENST00000613699 155 ntBASIC7.46□□□□□ -1.22
TPM4P67936 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.46□□□□□ -1.22
TPM4P67936 AC087894.3-201ENST00000623682 349 ntBASIC7.46□□□□□ -1.22
TPM4P67936 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.46□□□□□ -1.22
TPM4P67936 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.46□□□□□ -1.22
TPM4P67936 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TPM4P67936 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TPM4P67936 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
TPM4P67936 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TPM4P67936 OR5M2P-202ENST00000641241 4242 ntBASIC7.46□□□□□ -1.22
TPM4P67936 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
TPM4P67936 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.46□□□□□ -1.22
TPM4P67936 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TPM4P67936 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
TPM4P67936 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM4P67936 AC062022.1-201ENST00000451026 1684 ntBASIC7.45□□□□□ -1.22
TPM4P67936 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM4P67936 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TPM4P67936 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM4P67936 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TPM4P67936 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
TPM4P67936 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
TPM4P67936 SNORD8-201ENST00000363915 110 ntBASIC7.45□□□□□ -1.22
TPM4P67936 RNU1-55P-201ENST00000365510 158 ntBASIC7.45□□□□□ -1.22
TPM4P67936 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.45□□□□□ -1.22
TPM4P67936 RPS3AP5-201ENST00000389400 821 ntBASIC7.45□□□□□ -1.22
TPM4P67936 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM4P67936 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.45□□□□□ -1.22
TPM4P67936 PPIL1P1-201ENST00000423936 499 ntBASIC7.45□□□□□ -1.22
TPM4P67936 AL645936.2-201ENST00000430565 928 ntBASIC7.45□□□□□ -1.22
TPM4P67936 FTLP17-201ENST00000432567 525 ntBASIC7.45□□□□□ -1.22
TPM4P67936 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.45□□□□□ -1.22
TPM4P67936 AL451063.1-201ENST00000450164 1133 ntBASIC7.45□□□□□ -1.22
TPM4P67936 RPS26P11-201ENST00000463445 348 ntBASIC7.45□□□□□ -1.22
TPM4P67936 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.45□□□□□ -1.22
TPM4P67936 RN7SL216P-201ENST00000471607 298 ntBASIC7.45□□□□□ -1.22
TPM4P67936 RPS26P6-201ENST00000475156 348 ntBASIC7.45□□□□□ -1.22
TPM4P67936 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.45□□□□□ -1.22
TPM4P67936 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.45□□□□□ -1.22
TPM4P67936 EIF3KP1-201ENST00000513279 656 ntBASIC7.45□□□□□ -1.22
TPM4P67936 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.45□□□□□ -1.22
TPM4P67936 AC106785.4-201ENST00000569492 412 ntBASIC7.45□□□□□ -1.22
TPM4P67936 AC233699.1-201ENST00000569955 1168 ntBASIC7.45□□□□□ -1.22
TPM4P67936 EIF4A3P1-201ENST00000578499 647 ntBASIC7.45□□□□□ -1.22
TPM4P67936 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.45□□□□□ -1.22
TPM4P67936 AC011447.2-201ENST00000592921 283 ntBASIC7.45□□□□□ -1.22
TPM4P67936 AC006116.6-201ENST00000593258 1103 ntBASIC7.45□□□□□ -1.22
TPM4P67936 AC025171.4-201ENST00000607250 1047 ntBASIC7.45□□□□□ -1.22
TPM4P67936 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
TPM4P67936 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM4P67936 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM4P67936 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.45□□□□□ -1.22
TPM4P67936 KYNUP2-201ENST00000582280 1329 ntBASIC7.45□□□□□ -1.22
TPM4P67936 AL512329.1-201ENST00000404600 1592 ntBASIC7.45□□□□□ -1.22
TPM4P67936 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TPM4P67936 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.45□□□□□ -1.22
TPM4P67936 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
TPM4P67936 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
TPM4P67936 RACGAP1P-201ENST00000550663 1879 ntBASIC7.45□□□□□ -1.22
TPM4P67936 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
TPM4P67936 AC068769.1-201ENST00000474767 2426 ntBASIC7.44□□□□□ -1.22
TPM4P67936 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
TPM4P67936 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
TPM4P67936 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TPM4P67936 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.44□□□□□ -1.22
TPM4P67936 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.44□□□□□ -1.22
TPM4P67936 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
TPM4P67936 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TPM4P67936 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TPM4P67936 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TPM4P67936 RNU4-81P-201ENST00000363561 144 ntBASIC7.44□□□□□ -1.22
TPM4P67936 RNA5SP53-201ENST00000391299 120 ntBASIC7.44□□□□□ -1.22
TPM4P67936 AC090114.1-201ENST00000393266 448 ntBASIC7.44□□□□□ -1.22
TPM4P67936 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.44□□□□□ -1.22
TPM4P67936 AL157698.1-201ENST00000415190 1011 ntBASIC7.44□□□□□ -1.22
TPM4P67936 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC7.44□□□□□ -1.22
TPM4P67936 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.44□□□□□ -1.22
TPM4P67936 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.44□□□□□ -1.22
TPM4P67936 AC105052.2-201ENST00000434317 794 ntBASIC7.44□□□□□ -1.22
TPM4P67936 TVP23CP1-201ENST00000450317 639 ntBASIC7.44□□□□□ -1.22
TPM4P67936 RN7SL308P-201ENST00000464971 297 ntBASIC7.44□□□□□ -1.22
TPM4P67936 RN7SL815P-201ENST00000470970 290 ntBASIC7.44□□□□□ -1.22
TPM4P67936 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.44□□□□□ -1.22
TPM4P67936 RNA5SP278-201ENST00000517055 102 ntBASIC7.44□□□□□ -1.22
TPM4P67936 IGLC4-201ENST00000517690 248 ntBASIC7.44□□□□□ -1.22
TPM4P67936 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.44□□□□□ -1.22
TPM4P67936 AC084337.1-201ENST00000524809 686 ntBASIC7.44□□□□□ -1.22
TPM4P67936 PHBP2-201ENST00000532859 806 ntBASIC7.44□□□□□ -1.22
TPM4P67936 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.44□□□□□ -1.22
TPM4P67936 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.44□□□□□ -1.22
TPM4P67936 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.44□□□□□ -1.22
TPM4P67936 AC011921.2-201ENST00000589465 152 ntBASIC7.44□□□□□ -1.22
TPM4P67936 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC7.44□□□□□ -1.22
TPM4P67936 AL031777.2-201ENST00000611953 196 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms